RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 EIF3GO75821 320 aaKnown RBP eCLIP3.57□□□□□ -1.84
BRCA1-204ENST00000412061 TNFAIP8O95379 198 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 SLC2A10O95528 541 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 RENP00797 406 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 CATP04040 527 aaKnown RBP3.57□□□□□ -1.84
BRCA1-204ENST00000412061 CSNK2A2P19784 350 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-204ENST00000412061 KDELR2P33947 212 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 ARR3P36575 388 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 RANBP1P43487 201 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 PRLHRP49683 370 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 RGS19P49795 217 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 VSNL1P62760 191 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 SLC35B1P78383 322 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 C2orf80Q0P641 193 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 VAX1Q5SQQ9 334 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 DUPD1Q68J44 220 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 FAHD1Q6P587 224 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 TFAP2EQ6VUC0 442 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 ABHD13Q7L211 337 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 LRRC6Q86X45 466 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 SPATA3Q8NHX4 192 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 TFB1MQ8WVM0 346 aaKnown RBP3.57□□□□□ -1.84
BRCA1-204ENST00000412061 NOL4LQ96MY1 436 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-204ENST00000412061 COPS4Q9BT78 406 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 HES7Q9BYE0 225 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 SRXN1Q9BYN0 137 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 OCR1Q9BZK8 76 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 SLC38A1Q9H2H9 487 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 SCRT2Q9NQ03 307 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 ASIC3Q9UHC3 531 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 FADS3Q9Y5Q0 445 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 POLR3AO14802 1390 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-204ENST00000412061 RLFQ13129 1914 aa3.57□□□□□ -1.84
BRCA1-204ENST00000412061 A0A0A6YYH2 397 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 SMIM28A0A1B0GU29 152 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 A6NJ64 397 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 F6UB75 175 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 F8VZ95 297 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 SMKR1H3BMG3 65 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 M0QXV9 152 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 RAD51BO15315 384 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 AQP9O43315 295 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 FKBP6O75344 327 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 ZFAND5O76080 213 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 RCBTB2O95199 551 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 DUS4LO95620 317 aaKnown RBP3.56□□□□□ -1.84
BRCA1-204ENST00000412061 TACSTD2P09758 323 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 ZSCAN5DPP0CG00 497 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 SLC35E2BP0CK96 405 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 VDAC1P21796 283 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 CEACAM3P40198 252 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 CSNK1DP48730 415 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 DNASE1L1P49184 302 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-204ENST00000412061 EMP2P54851 167 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 ERVK11-1P61568 191 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 LMO4P61968 165 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 RPL32P62910 135 aaKnown RBP3.56□□□□□ -1.84
BRCA1-204ENST00000412061 PAFAH1B2P68402 229 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 MADCAM1Q13477 382 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 PON2Q15165 354 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 LTB4RQ15722 352 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 OLFML2AQ68BL7 652 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 C12orf54Q6X4T0 127 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 SSX6Q7RTT6 188 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 PAGE2Q7Z2X7 111 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF571Q7Z3V5 609 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-204ENST00000412061 CATSPER3Q86XQ3 398 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 SLC22A18ASQ8N1D0 253 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF740Q8NDX6 193 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 DUSP18Q8NEJ0 188 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 OR2A12Q8NGT7 310 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 UBA3Q8TBC4 463 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 CCDC127Q96BQ5 260 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 FAM122AQ96E09 287 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 CIB1Q99828 191 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 MICU1Q9BPX6 476 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 CCDC28BQ9BUN5 200 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 RNF126Q9BV68 326 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 KRTAP1-5Q9BYS1 174 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 ELOVL4Q9GZR5 314 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 LRRC19Q9H756 370 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 IMP3Q9NV31 184 aaKnown RBP3.56□□□□□ -1.84
BRCA1-204ENST00000412061 EMC3Q9P0I2 261 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 OR1A1Q9P1Q5 309 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 NAGKQ9UJ70 344 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 FHOD3Q2V2M9 1422 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 FANCIQ9NVI1 1328 aa3.56□□□□□ -1.84
BRCA1-204ENST00000412061 MSH6P52701 1360 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 IGLV4-3A0A075B6K6 122 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 IGHV1OR21-1A0A087WYE8 117 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 A0A0G2JRQ6 117 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 RBMY1BA6NDE4 496 aaKnown RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 RBMY1EA6NEQ0 496 aaKnown RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 EFCAB7A8K855 629 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF487B1APH4 448 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 KLRC4-KLRK1H3BQV0 150 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 hCG_2039718K7EN88 272 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 LIN7AO14910 233 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 ENSAO43768 121 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms