RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 KCTD18Q6PI47 426 aaPredicted RBP17.21■□□□□ 0.35
LMO2-203ENST00000411482 C4orf45Q96LM5 186 aa17.21■□□□□ 0.35
LMO2-203ENST00000411482 C5orf34Q96MH7 638 aa17.21■□□□□ 0.35
LMO2-203ENST00000411482 OXGR1Q96P68 337 aa17.21■□□□□ 0.35
LMO2-203ENST00000411482 NOX4Q9NPH5 578 aa17.21■□□□□ 0.35
LMO2-203ENST00000411482 COA3Q9Y2R0 106 aaPredicted RBP17.21■□□□□ 0.35
LMO2-203ENST00000411482 MGAQ8IWI9 3026 aa17.21■□□□□ 0.35
LMO2-203ENST00000411482 CACNA1BQ00975 2339 aa17.21■□□□□ 0.35
LMO2-203ENST00000411482 EML6Q6ZMW3 1958 aa17.21■□□□□ 0.35
LMO2-203ENST00000411482 AQP7P3A6NL99 342 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 C21orf140B9A014 251 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 PDCD5O14737 125 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 TRAF3IP2O43734 574 aaPredicted RBP17.21■□□□□ 0.34
LMO2-203ENST00000411482 CBR3O75828 277 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 PMS2P2O95744 297 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 ZNF17P17021 662 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 MAPK3P27361 379 aaPredicted RBP17.21■□□□□ 0.34
LMO2-203ENST00000411482 DPP4P27487 766 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 RPS18P62269 152 aaKnown RBP17.21■□□□□ 0.34
LMO2-203ENST00000411482 SLC35A1P78382 337 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 H3F3AP84243 136 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 ST3GAL2Q16842 350 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 DEGS2Q6QHC5 323 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 CCBE1Q6UXH8 406 aaPredicted RBP17.21■□□□□ 0.34
LMO2-203ENST00000411482 TMPPEQ6ZT21 453 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 HDDC2Q7Z4H3 204 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 IL22RA1Q8N6P7 574 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 DRAXINQ8NBI3 349 aaPredicted RBP17.21■□□□□ 0.34
LMO2-203ENST00000411482 CHAC2Q8WUX2 184 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 NSMAFQ92636 917 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 THRSPQ92748 146 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 ABHD6Q9BV23 337 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 ELOVL3Q9HB03 270 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 RHBDL2Q9NX52 303 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 IL17BQ9UHF5 180 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 IKZF2Q9UKS7 526 aa17.21■□□□□ 0.34
LMO2-203ENST00000411482 ZNF254O75437 659 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 RPP14O95059 124 aaKnown RBP17.2■□□□□ 0.34
LMO2-203ENST00000411482 HLA-DQA2P01906 255 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 ATF1P18846 271 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 AZGP1P25311 298 aaKnown RBP17.2■□□□□ 0.34
LMO2-203ENST00000411482 OTX2P32243 289 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 RFX2P48378 723 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 C19orf57Q0VDD7 668 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 MEP1BQ16820 701 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 TMEM176BQ3YBM2 270 aaPredicted RBP17.2■□□□□ 0.34
LMO2-203ENST00000411482 PYDC2Q56P42 97 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 THEM4Q5T1C6 240 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 ZNF468Q5VIY5 522 aaPredicted RBP17.2■□□□□ 0.34
LMO2-203ENST00000411482 UEVLDQ8IX04 471 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 PRSS35Q8N3Z0 413 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 OR1J4Q8NGS1 313 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 OR6X1Q8NH79 312 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 OR5B2Q96R09 309 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 GFI1Q99684 422 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 MED29Q9NX70 200 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 P4HTMQ9NXG6 502 aa17.2■□□□□ 0.34
LMO2-203ENST00000411482 GPR171O14626 319 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 RPS27P42677 84 aaKnown RBP17.19■□□□□ 0.34
LMO2-203ENST00000411482 KIR3DL2P43630 455 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 BIDP55957 195 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 OR2B6P58173 313 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 GPR85P60893 370 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 ADAM8P78325 824 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 P2RY14Q15391 338 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 HIST3H3Q16695 136 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 OR5M1Q8NGP8 315 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 SNRNP27Q8WVK2 155 aaKnown RBP17.19■□□□□ 0.34
LMO2-203ENST00000411482 PSMF1Q92530 271 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 HTRA1Q92743 480 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 RBP7Q96R05 134 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 ANKRD10Q9NXR5 420 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 ING1Q9UK53 422 aaPredicted RBP17.19■□□□□ 0.34
LMO2-203ENST00000411482 FREM3P0C091 2139 aa17.19■□□□□ 0.34
LMO2-203ENST00000411482 A0A1W2PPK0 400 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 SRSF10O75494 262 aaKnown RBP17.18■□□□□ 0.34
LMO2-203ENST00000411482 SLC2A2P11168 524 aaPredicted RBP17.18■□□□□ 0.34
LMO2-203ENST00000411482 ACER2Q5QJU3 275 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 JMJD6Q6NYC1 403 aaPredicted RBP17.18■□□□□ 0.34
LMO2-203ENST00000411482 LRRC69Q6ZNQ3 347 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 Q8N402 240 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 OR52N5Q8NH56 324 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 TRMT10AQ8TBZ6 339 aaKnown RBP17.18■□□□□ 0.34
LMO2-203ENST00000411482 GPR148Q8TDV2 347 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 ST7LQ8TDW4 575 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 MCHR2Q969V1 340 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 SLC25A44Q96H78 314 aaPredicted RBP17.18■□□□□ 0.34
LMO2-203ENST00000411482 MRI1Q9BV20 369 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 COMMD4Q9H0A8 199 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 B3GAT2Q9NPZ5 323 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 SPATA2Q9UM82 520 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 MRPS18CQ9Y3D5 142 aaKnown RBP17.18■□□□□ 0.34
LMO2-203ENST00000411482 KMT2BQ9UMN6 2715 aaPredicted RBP17.18■□□□□ 0.34
LMO2-203ENST00000411482 PCSK5Q92824 1860 aa17.18■□□□□ 0.34
LMO2-203ENST00000411482 IGKV1D-43A0A0B4J1Z2 117 aa17.17■□□□□ 0.34
LMO2-203ENST00000411482 A0A1W2PNR3 127 aa17.17■□□□□ 0.34
LMO2-203ENST00000411482 ZNF814B7Z6K7 855 aa17.17■□□□□ 0.34
LMO2-203ENST00000411482 PLA2G10O15496 165 aa17.17■□□□□ 0.34
LMO2-203ENST00000411482 EIF4EP06730 217 aaKnown RBP17.17■□□□□ 0.34
LMO2-203ENST00000411482 SPARCP09486 303 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms