RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
CBX3-203ENST00000409747 GEMIN6Q8WXD5 167 aaKnown RBP12.59□□□□□ -0.39
CBX3-203ENST00000409747 TMEM186Q96B77 213 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 RCN3Q96D15 328 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 NDEL1Q9GZM8 345 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 IGHV1-69-2A0A0G2JMI3 117 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 PLSCR5A0PG75 271 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 C5orf49A4QMS7 147 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 H3BSA7 217 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 CST2P09228 141 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 GAAP10253 952 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 CRYBB2P43320 205 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 SLC9A3P48764 834 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 OAFQ86UD1 273 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 RNF113BQ8IZP6 322 aaKnown RBP12.59□□□□□ -0.39
CBX3-203ENST00000409747 CPEB3Q8NE35 698 aaKnown RBP12.59□□□□□ -0.39
CBX3-203ENST00000409747 POM121L2Q96KW2 1035 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 TSPAN32Q96QS1 320 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 SAP30LQ9HAJ7 183 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 HIF1ANQ9NWT6 349 aa12.59□□□□□ -0.39
CBX3-203ENST00000409747 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
CBX3-203ENST00000409747 NDUFAB1O14561 156 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 LIPAP38571 399 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 ZNF81P51508 661 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 CTXN1P60606 82 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 ERVK-25P63136 954 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 PRKCDQ05655 676 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 SHQ1Q6PI26 577 aaKnown RBP12.58□□□□□ -0.4
CBX3-203ENST00000409747 ARL9Q6T311 187 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 NRMQ8IXM6 262 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 ACOT11Q8WXI4 607 aaPredicted RBP12.58□□□□□ -0.4
CBX3-203ENST00000409747 RAB39BQ96DA2 213 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 TIMD4Q96H15 378 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 WACQ9BTA9 647 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 CCDC134Q9H6E4 229 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 CYSLTR2Q9NS75 346 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 CMTM6Q9NX76 183 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 TREM2Q9NZC2 230 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 METRNQ9UJH8 293 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 TIMM10BQ9Y5J6 103 aa12.58□□□□□ -0.4
CBX3-203ENST00000409747 IGKV1D-43A0A0B4J1Z2 117 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 TRAV20A0A0B4J274 112 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 EFCAB9A8MZ26 197 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 FAM157AC9JC47 383 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 CLDN25C9JDP6 229 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 GSTA4O15217 222 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ICMTO60725 284 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 CDC14BO60729 498 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ZNF682O95780 498 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 PSG4Q00888 419 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 GLO1Q04760 184 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 HFEQ30201 348 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 IFI44LQ53G44 452 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 HSP90B2PQ58FF3 399 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ZMAT1Q5H9K5 638 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 MBNL2Q5VZF2 373 aaKnown RBP12.57□□□□□ -0.4
CBX3-203ENST00000409747 ZNF730Q6ZMV8 503 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 FOXL2NBQ6ZUU3 175 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 AKR7LQ8NHP1 331 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ELMOD3Q96FG2 381 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 HOPXQ9BPY8 73 aaPredicted RBP12.57□□□□□ -0.4
CBX3-203ENST00000409747 OR2H1Q9GZK4 316 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ELOVL3Q9HB03 270 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ARMCX1Q9P291 453 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 TRAV27A0A087WT01 109 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 A0A1W2PPL8 197 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 C12orf71A8MTZ7 269 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 CXCR6O00574 342 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 CCDC22O60826 627 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 MAKP20794 623 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 MSR1P21757 451 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 LAP3P28838 519 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 YAP1P46937 504 aaKnown RBP12.57□□□□□ -0.4
CBX3-203ENST00000409747 ARHGDIAP52565 204 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 LMO4P61968 165 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 LIPEQ05469 1076 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 USP51Q70EK9 711 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 FKBP9P1Q75LS8 142 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 VTCN1Q7Z7D3 282 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 IGFN1Q86VF2 1251 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 CYP4Z1Q86W10 505 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ZNF101Q8IZC7 436 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 POU5F2Q8N7G0 328 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 LRRC75AQ8NAA5 344 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 FAM156AQ8NDB6 213 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 OR51A7Q8NH64 312 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 IPCEF1Q8WWN9 437 aaPredicted RBP12.57□□□□□ -0.4
CBX3-203ENST00000409747 MARS2Q96GW9 593 aaKnown RBP12.57□□□□□ -0.4
CBX3-203ENST00000409747 LRRC37BQ96QE4 947 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 EGLN1Q9GZT9 426 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ANKRD19PQ9H560 264 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 ZNF665Q9H7R5 613 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 LPAR2Q9HBW0 351 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 MAN2C1Q9NTJ4 1040 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 RHCGQ9UBD6 479 aa12.57□□□□□ -0.4
CBX3-203ENST00000409747 NDRG4Q9ULP0 352 aaKnown RBP12.57□□□□□ -0.4
CBX3-203ENST00000409747 LOC100509620A0A075B734 347 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 A0A0A6YYJ9 748 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms