RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 SLC43A1O75387 559 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 TGM6O95932 706 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 KRT8P05787 483 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 CPN1P15169 458 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 CRYBB2P43320 205 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 GBX2P52951 348 aaPredicted RBP11.02□□□□□ -0.64
CHMP3-204ENST00000409727 ACSM1Q08AH1 577 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 INSL4Q14641 139 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 SGCAQ16586 387 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 C19orf48Q6RUI8 117 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 DCXRQ7Z4W1 244 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 SYS1Q8N2H4 156 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF837Q96EG3 531 aaPredicted RBP11.02□□□□□ -0.64
CHMP3-204ENST00000409727 MRPL48Q96GC5 212 aaKnown RBP11.02□□□□□ -0.64
CHMP3-204ENST00000409727 ABHD6Q9BV23 337 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 HDHD5Q9BXW7 423 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 SLCO1C1Q9NYB5 712 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 PTTG2Q9NZH5 202 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 KLHL9Q9P2J3 617 aa11.02□□□□□ -0.64
CHMP3-204ENST00000409727 MRM2Q9UI43 246 aaKnown RBP11.02□□□□□ -0.64
CHMP3-204ENST00000409727 FOXD3Q9UJU5 478 aaPredicted RBP11.02□□□□□ -0.64
CHMP3-204ENST00000409727 IGF2RP11717 2491 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 CD8B2A6NJW9 211 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 SLC22A20A6NK97 555 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 SLC22A1O15245 554 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 MRPL33O75394 65 aaKnown RBP11.02□□□□□ -0.65
CHMP3-204ENST00000409727 CD8BP10966 210 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 NR2C1P13056 603 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 EDNRAP25101 427 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 GABRA5P31644 462 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 UCNP55089 124 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 FABP5Q01469 135 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 TIMM50Q3ZCQ8 353 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 SIAH3Q8IW03 269 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 C20orf196Q8IYI0 205 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 GPR137CQ8N3F9 429 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 FNDC8Q8TC99 324 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 HSD17B8Q92506 261 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 TRIB1Q96RU8 372 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 DCLRE1CQ96SD1 692 aaKnown RBP11.02□□□□□ -0.65
CHMP3-204ENST00000409727 TSC22D3Q99576 134 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 MNTQ99583 582 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 TTYH2Q9BSA4 534 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 CRLF2Q9HC73 371 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 SSR3Q9UNL2 185 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 RCE1Q9Y256 329 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 SF3B6Q9Y3B4 125 aaKnown RBP11.02□□□□□ -0.65
CHMP3-204ENST00000409727 UGT2A1Q9Y4X1 527 aa11.02□□□□□ -0.65
CHMP3-204ENST00000409727 SPENQ96T58 3664 aaKnown RBP11.01□□□□□ -0.65
CHMP3-204ENST00000409727 METTL15A6NJ78 407 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 AQP7O14520 342 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 PHYHO14832 338 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 KRT33AO76009 404 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 GUCA1AP43080 201 aaPredicted RBP11.01□□□□□ -0.65
CHMP3-204ENST00000409727 TAS2R43P59537 309 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 SIRPAP78324 504 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 BDH1Q02338 343 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 EGR3Q06889 387 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF684Q5T5D7 378 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 LIPNQ5VXI9 398 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 C22orf42Q6IC83 251 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 OR7E24Q6IFN5 339 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 P4HA3Q7Z4N8 544 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 KRT77Q7Z794 578 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 LRRC18Q8N456 261 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 CENPMQ9NSP4 180 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 EMC3Q9P0I2 261 aa11.01□□□□□ -0.65
CHMP3-204ENST00000409727 ANKRD11Q6UB99 2663 aaPredicted RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 IGKV3D-15A0A087WSY6 115 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 A0A087WV48 116 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 TRBV2A0A0J9YWF9 115 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 GPR171O14626 319 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 DHHO43323 396 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 HRGP04196 525 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 TACSTD2P09758 323 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 PLA2G5P39877 138 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 SERPINB10P48595 397 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 UNQ6494/PRO21346Q6UXR6 183 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 LINGO2Q7L985 606 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 OR52N5Q8NH56 324 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 ASB17Q8WXJ9 295 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 ZCCHC14Q8WYQ9 949 aaKnown RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 GHSRQ92847 366 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 SARAFQ96BY9 339 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 OR8B4Q96RC9 309 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 MYCBPQ99417 103 aaPredicted RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 BCL7BQ9BQE9 202 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 MROQ9BYG7 248 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 PRDM14Q9GZV8 571 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 DCSTAMPQ9H295 470 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 ELOVL3Q9HB03 270 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 POLE4Q9NR33 117 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 TXNL4BQ9NX01 149 aaKnown RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 ASH2LQ9UBL3 628 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 ST6GALNAC2Q9UJ37 374 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 GTF2A1LQ9UNN4 478 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 BOD1L1Q8NFC6 3051 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 A0A1B0GVC2 190 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 DVL2O14641 736 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 TMCC2O75069 709 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms