RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 RYDENQ9NUL5 291 aaKnown RBP18.49■□□□□ 0.55
USP39-203ENST00000409470 KLHL9Q9P2J3 617 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 KLHL13Q9P2N7 655 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 V9GY05 133 aa18.49■□□□□ 0.55
USP39-203ENST00000409470 AQP7P3A6NL99 342 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 IFITM5A6NNB3 132 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 GPR171O14626 319 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 ZIC3O60481 467 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 WNT11O96014 354 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 DLSTP36957 453 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 CCR9P51686 369 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 EIF3IQ13347 325 aaKnown RBP18.48■□□□□ 0.55
USP39-203ENST00000409470 STAC2Q6ZMT1 411 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 NOXO1Q8NFA2 376 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 OR51A4Q8NGJ6 313 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 TSEN15Q8WW01 171 aaKnown RBP18.48■□□□□ 0.55
USP39-203ENST00000409470 TMEM106AQ96A25 262 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 NTNG2Q96CW9 530 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 SLC25A44Q96H78 314 aaPredicted RBP18.48■□□□□ 0.55
USP39-203ENST00000409470 MRPL13Q9BYD1 178 aaKnown RBP18.48■□□□□ 0.55
USP39-203ENST00000409470 SPATA2Q9UM82 520 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 SLC22A13Q9Y226 551 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 SDK2Q58EX2 2172 aa18.48■□□□□ 0.55
USP39-203ENST00000409470 OR2M5A3KFT3 312 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 ANKRD61A6NGH8 418 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 AIPO00170 330 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 GALR2O43603 387 aaPredicted RBP18.47■□□□□ 0.55
USP39-203ENST00000409470 TRAF3IP2O43734 574 aaPredicted RBP18.47■□□□□ 0.55
USP39-203ENST00000409470 RAMP1O60894 148 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 AQP8O94778 261 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 PMS2P2O95744 297 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 PNPP00491 289 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 RAF1P04049 648 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 DNASE1L1P49184 302 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 CD300CQ08708 224 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 SPEM2Q0P670 501 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 ACER2Q5QJU3 275 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 CARD17Q5XLA6 110 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 IL17RDQ8NFM7 739 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 LGALS14Q8TCE9 139 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 KCNJ15Q99712 375 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 WACQ9BTA9 647 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 MED12Q93074 2177 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 HRGP04196 525 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 PGA4P0DJD7 388 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 PGA3P0DJD8 388 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 PRKAR1AP10644 381 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 KLK2P20151 261 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 MFGE8Q08431 387 aaPredicted RBP18.47■□□□□ 0.55
USP39-203ENST00000409470 ZNF239Q16600 458 aaKnown RBP18.47■□□□□ 0.55
USP39-203ENST00000409470 ZNF57Q68EA5 555 aaPredicted RBP18.47■□□□□ 0.55
USP39-203ENST00000409470 PYHIN1Q6K0P9 492 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 H3F3CQ6NXT2 135 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 RAB43Q86YS6 212 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 ENKURQ8TC29 256 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 C11orf40Q8WZ69 217 aa18.47■□□□□ 0.55
USP39-203ENST00000409470 TRBV5-7A0A0A0MS05 114 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 A0A1W2PPL8 197 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 ZNF726A6NNF4 738 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 RAD1O60671 282 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 PCK2Q16822 640 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 HES3Q5TGS1 186 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 MZT2BQ6NZ67 158 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 CORO6Q6QEF8 472 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 OR6X1Q8NH79 312 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 MMP28Q9H239 520 aa18.46■□□□□ 0.55
USP39-203ENST00000409470 SLC43A1O75387 559 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 ZNF17P17021 662 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 LAP3P28838 519 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 MAP2K3P46734 347 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 CD97P48960 835 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 UBE2NLQ5JXB2 153 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 ST7LQ8TDW4 575 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 ADAMTS14Q8WXS8 1223 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 THRSPQ92748 146 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 PPP1R14AQ96A00 147 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 PIGQQ9BRB3 760 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 GPR87Q9BY21 358 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 CENPMQ9NSP4 180 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 A0A0G2JMM0 328 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 A0A1W2PPB8 328 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 A0A1W2PRS3 328 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 ANXA2P2A6NMY6 339 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 KIR3DP1A8MWS1 328 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 C21orf140B9A014 251 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 TFECO14948 347 aaPredicted RBP18.45■□□□□ 0.54
USP39-203ENST00000409470 MAS1P04201 325 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 ANXA2P07355 339 aaKnown RBP18.45■□□□□ 0.54
USP39-203ENST00000409470 OC90Q02509 493 aaPredicted RBP18.45■□□□□ 0.54
USP39-203ENST00000409470 CATSPERDQ86XM0 798 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.45■□□□□ 0.54
USP39-203ENST00000409470 BEST3Q8N1M1 668 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 RFT1Q96AA3 541 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 THOC3Q96J01 351 aaKnown RBP18.45■□□□□ 0.54
USP39-203ENST00000409470 ABHD1Q96SE0 405 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 THAP7Q9BT49 309 aaPredicted RBP18.45■□□□□ 0.54
USP39-203ENST00000409470 SEC61A2Q9H9S3 476 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 FBXL3Q9UKT7 428 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 MRPS7Q9Y2R9 242 aaKnown RBP18.45■□□□□ 0.54
USP39-203ENST00000409470 EMC9Q9Y3B6 208 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms