RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ZNF169Q14929 603 aaPredicted RBP12.46□□□□□ -0.41
GPNMB-203ENST00000409458 DGUOKQ16854 277 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 TEX30Q5JUR7 227 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 RPL22L1Q6P5R6 122 aaKnown RBP12.46□□□□□ -0.41
GPNMB-203ENST00000409458 LRRN1Q6UXK5 716 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 TMEM91Q6ZNR0 172 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 LINC00346Q8IVM7 164 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 OR6N1Q8NGY5 312 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 RPS4Y2Q8TD47 263 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 RNF128Q8TEB7 428 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 ASB17Q8WXJ9 295 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 HSD17B8Q92506 261 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 HTRA1Q92743 480 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 ABHD6Q9BV23 337 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 RCE1Q9Y256 329 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 UGT2A1Q9Y4X1 527 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 CLPXO76031 633 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 AQP8O94778 261 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 TACSTD2P09758 323 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 NR2C1P13056 603 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 FGF9P31371 208 aaPredicted RBP12.45□□□□□ -0.42
GPNMB-203ENST00000409458 TGM4P49221 684 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 ZNF133P52736 654 aaPredicted RBP12.45□□□□□ -0.42
GPNMB-203ENST00000409458 CCDC58Q4VC31 144 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 C10orf128Q5T292 105 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 LIPNQ5VXI9 398 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 SPATC1Q76KD6 591 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 DCXRQ7Z4W1 244 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 KCTD20Q7Z5Y7 419 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 C20orf196Q8IYI0 205 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 OR10H5Q8NGA6 315 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 OR13C5Q8NGS8 318 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 OR52N5Q8NH56 324 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 ST7LQ8TDW4 575 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 GHSRQ92847 366 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 PNPLA2Q96AD5 504 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 WDYHV1Q96HA8 205 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 SEC61A2Q9H9S3 476 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 ELOVL3Q9HB03 270 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 EMC7Q9NPA0 242 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 CCDC59Q9P031 241 aaKnown RBP12.45□□□□□ -0.42
GPNMB-203ENST00000409458 A0A087WV48 116 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 K7EM74 188 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 SYNGR4O95473 234 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 IGHG3P01860 377 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 ROM1Q03395 351 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 CORO6Q6QEF8 472 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 AAED1Q7RTV5 226 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 FNDC9Q8TBE3 224 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 KCTD7Q96MP8 289 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 COQ7Q99807 217 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 PDCD1LG2Q9BQ51 273 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 POLE4Q9NR33 117 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 PAQR5Q9NXK6 330 aaPredicted RBP12.45□□□□□ -0.42
GPNMB-203ENST00000409458 DKK4Q9UBT3 224 aa12.45□□□□□ -0.42
GPNMB-203ENST00000409458 MCTS1Q9ULC4 181 aaKnown RBP12.45□□□□□ -0.42
GPNMB-203ENST00000409458 DNAJC13O75165 2243 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 IGKV3D-15A0A087WSY6 115 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 TRBV2A0A0J9YWF9 115 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 A0A1B0GTH9 108 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 WISP2O76076 250 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 CD1AP06126 327 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 GALP22466 123 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 RPS19P39019 145 aaKnown RBP12.44□□□□□ -0.42
GPNMB-203ENST00000409458 TRAM1Q15629 374 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 FOXL2NBQ6ZUU3 175 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.44□□□□□ -0.42
GPNMB-203ENST00000409458 KRT77Q7Z794 578 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 EGFL6Q8IUX8 553 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 ZNF679Q8IYX0 411 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 INTS12Q96CB8 462 aaKnown RBP12.44□□□□□ -0.42
GPNMB-203ENST00000409458 TAAR6Q96RI8 345 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 ULBP2Q9BZM5 246 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 GALNT8Q9NY28 637 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 CYB5R1Q9UHQ9 305 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 CAMK2AQ9UQM7 478 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 GSTK1Q9Y2Q3 226 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
GPNMB-203ENST00000409458 APC2O95996 2303 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 SHISA3A0PJX4 238 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 HSPB2A8KAH6 182 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 K7ENP7 123 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 DHHO43323 396 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 SLC43A1O75387 559 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 SC5DO75845 299 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 CDRT1O95170 752 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 CLEC2LP0C7M8 214 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 CPN1P15169 458 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 MRPL28Q13084 256 aaKnown RBP12.43□□□□□ -0.42
GPNMB-203ENST00000409458 ALKBH1Q13686 389 aaKnown RBP12.43□□□□□ -0.42
GPNMB-203ENST00000409458 HSPB2Q16082 182 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 KCNMB1Q16558 191 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 OR7E24Q6IFN5 339 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 KCTD18Q6PI47 426 aaPredicted RBP12.43□□□□□ -0.42
GPNMB-203ENST00000409458 INO80CQ6PI98 192 aaPredicted RBP12.43□□□□□ -0.42
GPNMB-203ENST00000409458 Q6ZS92 163 aa12.43□□□□□ -0.42
GPNMB-203ENST00000409458 RBMXL3Q8N7X1 1067 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms