RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 A0A0B4J2E0 115 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 A0A1B0GX12 115 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 SDHDO14521 159 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 TIMM8AO60220 97 aaPredicted RBP6.56□□□□□ -1.36
LSM5-202ENST00000409292 FMO6PO60774 539 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 MFN2O95140 757 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 TGDSO95455 350 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 FSHBP01225 129 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 IGHV1-46P01743 117 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 ALDOCP09972 364 aaKnown RBP6.56□□□□□ -1.36
LSM5-202ENST00000409292 CCL2P13500 99 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 MAKP20794 623 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 BGNP21810 368 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 TUBG1P23258 451 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 ZFP36P26651 326 aaKnown RBP6.56□□□□□ -1.36
LSM5-202ENST00000409292 STOMP27105 288 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 IL12AP29459 219 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 MVDP53602 400 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 CDH12P55289 794 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 PCBD1P61457 104 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 TNFAIP6P98066 277 aaPredicted RBP6.56□□□□□ -1.36
LSM5-202ENST00000409292 ZNF154Q13106 437 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 TAF11Q15544 211 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 MAPK11Q15759 364 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 CDPF1Q6NVV7 123 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 C16orf87Q6PH81 154 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 LRRN1Q6UXK5 716 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 ZNF584Q8IVC4 421 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 LRRC18Q8N456 261 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 NFKBIDQ8NI38 313 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 FNDC8Q8TC99 324 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 SLC26A7Q8TE54 656 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 DVL3Q92997 716 aaPredicted RBP6.56□□□□□ -1.36
LSM5-202ENST00000409292 MAL2Q969L2 176 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 TMIGD2Q96BF3 282 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 MPP4Q96JB8 637 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 COG8Q96MW5 612 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 DUX5Q96PT3 197 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 DCLRE1CQ96SD1 692 aaKnown RBP6.56□□□□□ -1.36
LSM5-202ENST00000409292 MCHR1Q99705 422 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 WDR55Q9H6Y2 383 aaPredicted RBP6.56□□□□□ -1.36
LSM5-202ENST00000409292 SIAEQ9HAT2 523 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 PATZ1Q9HBE1 687 aaKnown RBP6.56□□□□□ -1.36
LSM5-202ENST00000409292 TUBG2Q9NRH3 451 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 PNPOQ9NVS9 261 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 ZNF69Q9UC07 566 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 OPN4Q9UHM6 478 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 ZNF229Q9UJW7 825 aa6.56□□□□□ -1.36
LSM5-202ENST00000409292 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.55□□□□□ -1.36
LSM5-202ENST00000409292 C5orf49A4QMS7 147 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 LRRC30A6NM36 301 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 CHP2O43745 196 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 UBOX5O94941 541 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 CH25HO95992 272 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 C1QCP02747 245 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 CD55P08174 381 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 ADH4P08319 380 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 KITP10721 976 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 ZNF12P17014 697 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 HTR2AP28223 471 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 IFNA8P32881 189 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 BPIFB3P59826 476 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 BST1Q10588 318 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 SCARB2Q14108 478 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 PDCD1Q15116 288 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 NPTX1Q15818 432 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 SGCAQ16586 387 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 MTX3Q5HYI7 312 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 PABPC1L2AQ5JQF8 200 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 THEM4Q5T1C6 240 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 MBNL2Q5VZF2 373 aaKnown RBP6.55□□□□□ -1.36
LSM5-202ENST00000409292 SLC27A4Q6P1M0 643 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 NLRC3Q7RTR2 1065 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 PTOV1Q86YD1 416 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 PARP8Q8N3A8 854 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 NPEPL1Q8NDH3 523 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 NOXO1Q8NFA2 376 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 VANGL1Q8TAA9 524 aaPredicted RBP6.55□□□□□ -1.36
LSM5-202ENST00000409292 ABHD4Q8TB40 342 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 SLC25A40Q8TBP6 338 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 MCHR2Q969V1 340 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 LRRC58Q96CX6 371 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 MOGAT1Q96PD6 335 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 TSPAN32Q96QS1 320 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 RBP7Q96R05 134 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 SORT1Q99523 831 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 TMEM109Q9BVC6 243 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 MMP27Q9H306 513 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 SLCO1B3Q9NPD5 702 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 SDR39U1Q9NRG7 319 aaPredicted RBP6.55□□□□□ -1.36
LSM5-202ENST00000409292 MAN2C1Q9NTJ4 1040 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 TMEM106BQ9NUM4 274 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 ZNF224Q9NZL3 707 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 LEF1Q9UJU2 399 aaPredicted RBP6.55□□□□□ -1.36
LSM5-202ENST00000409292 NDRG4Q9ULP0 352 aaKnown RBP6.55□□□□□ -1.36
LSM5-202ENST00000409292 LRCH1Q9Y2L9 728 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 CHST2Q9Y4C5 530 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 MMP24Q9Y5R2 645 aa6.55□□□□□ -1.36
LSM5-202ENST00000409292 INSIG2Q9Y5U4 225 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms