RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 IGLV3-9A0A075B6K5 115 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 TRAV27A0A087WT01 109 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 A0A087WUU8 490 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 IGHV4-61A0A0C4DH41 118 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 A0A1W2PPL8 197 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 SNX3O60493 162 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 DCTN3O75935 186 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 NDUFB2O95178 105 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 TFP02787 698 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 CD14P08571 375 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 MMP7P09237 267 aaPredicted RBP7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 PATE4P0C8F1 98 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 FAM157BP0CG42 384 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 COX5BP10606 129 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF250P15622 560 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF32P17041 273 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 SRD5A1P18405 259 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 CCNOP22674 350 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 IFNGR2P38484 337 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 YAP1P46937 504 aaKnown RBP7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 TMEM33P57088 247 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 FMODQ06828 376 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 LAPTM4AQ15012 233 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF718Q3SXZ3 478 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 SAMD4BQ5PRF9 694 aaKnown RBP7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 GLYATQ6IB77 296 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 DNM1P34Q6PK57 102 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 SLC25A47Q6Q0C1 308 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 C16orf89Q6UX73 402 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 FOXL2NBQ6ZUU3 175 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 ADCK1Q86TW2 530 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 TREML1Q86YW5 311 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 WDFY1Q8IWB7 410 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 LINC01356Q8N9X3 169 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 NPEPL1Q8NDH3 523 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 ICA1LQ8NDH6 482 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 OR1J1Q8NGS3 322 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 OR13C2Q8NGS9 318 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 IPCEF1Q8WWN9 437 aaPredicted RBP7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 TMEM158Q8WZ71 300 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 NSMAFQ92636 917 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 NMD3Q96D46 503 aaKnown RBP7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 COG8Q96MW5 612 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 TSPAN32Q96QS1 320 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 DIRC2Q96SL1 478 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 MYLK2Q9H1R3 596 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 NMNAT1Q9HAN9 279 aaPredicted RBP7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 TAAR3PQ9P1P4 343 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 UGT2A1Q9Y4X1 527 aa7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.8□□□□□ -1.16
SNORD88A-201ENST00000408314 C5orf49A4QMS7 147 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 C17orf100A8MU93 164 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 KIAA1324LA8MWY0 1029 aaPredicted RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 B4DSR2 109 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 J3KTA2 159 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 J3QW42 95 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 FFAR1O14842 300 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 TPD52L2O43399 206 aaKnown RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 ICMTO60725 284 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 TGFAP01135 160 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 IGHV3-13P01766 116 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 HSD17B1P14061 328 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 NCK1P16333 377 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 MAKP20794 623 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 GSTM3P21266 225 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 SDHAP31040 664 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 ALDH3B1P43353 468 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 GPR4P46093 362 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 RPS6KA3P51812 740 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 MXRA7P84157 204 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 SLC3A1Q07837 685 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 KRR1Q13601 381 aaKnown RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 RIN1Q13671 783 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 CXXC5Q7LFL8 322 aaKnown RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 GLCCI1Q86VQ1 547 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 PGAM4Q8N0Y7 254 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 LRRC75AQ8NAA5 344 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 FGFBP3Q8TAT2 258 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 POP5Q969H6 163 aaKnown RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 NABP1Q96AH0 204 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 MSI2Q96DH6 328 aaKnown RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 TIMD4Q96H15 378 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 RSRC1Q96IZ7 334 aaKnown RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 NSMCE2Q96MF7 247 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 LRRC37BQ96QE4 947 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 SNX18Q96RF0 628 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 GPX7Q96SL4 187 aaPredicted RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 OR2H1Q9GZK4 316 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 EGLN1Q9GZT9 426 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 GORASP2Q9H8Y8 452 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 POLE4Q9NR33 117 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 DECR2Q9NUI1 292 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 DCAF13Q9NV06 445 aaKnown RBP7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 ATPIF1Q9UII2 106 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 ADAM21Q9UKJ8 722 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 TMCC3Q9ULS5 477 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 ARL2BPQ9Y2Y0 163 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 SNX13Q9Y5W8 968 aa7.79□□□□□ -1.16
SNORD88A-201ENST00000408314 RTTNQ86VV8 2226 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms