RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 UBE2J2Q8N2K1 259 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GPR137CQ8N3F9 429 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 LRRC18Q8N456 261 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 YIPF7Q8N8F6 280 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 OR52N1Q8NH53 320 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 RNF128Q8TEB7 428 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 RAB2BQ8WUD1 216 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 C11orf40Q8WZ69 217 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 SARAFQ96BY9 339 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 YIPF6Q96EC8 236 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 ZNF837Q96EG3 531 aaPredicted RBP3.29□□□□□ -1.88
RTN4-208ENST00000404909 AMELYQ99218 206 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TM9SF2Q99805 663 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 C12orf49Q9H741 205 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 TRIM36Q9NQ86 728 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 EMC3Q9P0I2 261 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 GTF2A1LQ9UNN4 478 aa3.29□□□□□ -1.88
RTN4-208ENST00000404909 A0A087WV48 116 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 PRR32B1ATL7 298 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CENPBD1B2RD01 187 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 H3BSH0 61 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 GPR171O14626 319 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 AHCYL1O43865 530 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 TMCC2O75069 709 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ATE1O95260 518 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CRYABP02511 175 aaKnown RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 KRT8P05787 483 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 YES1P07947 543 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 NR2C1P13056 603 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ALOX5APP20292 161 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 EDNRAP25101 427 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 PSMA1P25786 263 aaKnown RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 TMBIM6P55061 237 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 NCS1P62166 190 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 SLC3A1Q07837 685 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ODF4Q2M2E3 257 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 SLC18B1Q6NT16 456 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 C3P1Q6ZMU1 363 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 SLC16A12Q6ZSM3 486 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 FAM220AQ7Z4H9 259 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 DCXRQ7Z4W1 244 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CDC20BQ86Y33 519 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ANKRD13BQ86YJ7 626 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ZNF100Q8IYN0 542 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 TEX19Q8NA77 164 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 OTOSQ8NHW6 89 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 PELI1Q96FA3 418 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 MRPL48Q96GC5 212 aaKnown RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 JAM3Q9BX67 310 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 MROQ9BYG7 248 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 RNF167Q9H6Y7 350 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 MARCH7Q9H992 704 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CENPMQ9NSP4 180 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ASH2LQ9UBL3 628 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ENPP5Q9UJA9 477 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ZMIZ1Q9ULJ6 1067 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 TMEM14AQ9Y6G1 99 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 A0A1W2PPW3 197 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 AQP7O14520 342 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 DHHO43323 396 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 TPOP07202 933 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 GAAP10253 952 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 PCSK6P29122 969 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 GBX2P52951 348 aaPredicted RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 RNPS1Q15287 305 aaKnown RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 CTF1Q16619 201 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 HIST3H3Q16695 136 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 OR7E24Q6IFN5 339 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 SLC25A47Q6Q0C1 308 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 VASH1Q7L8A9 365 aaPredicted RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 KRT77Q7Z794 578 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ATCAYQ86WG3 371 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 C20orf196Q8IYI0 205 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CNEP1R1Q8N9A8 125 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ZNF485Q8NCK3 441 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ZNF420Q8TAQ5 688 aaPredicted RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 NDNFQ8TB73 568 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 FNDC8Q8TC99 324 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 TTYH2Q9BSA4 534 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CENPOQ9BU64 300 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ABHD6Q9BV23 337 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 HDHD5Q9BXW7 423 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ELOVL3Q9HB03 270 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 PARPBPQ9NWS1 579 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 SLCO1C1Q9NYB5 712 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 RCE1Q9Y256 329 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 N6AMT1Q9Y5N5 214 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 SIRT4Q9Y6E7 314 aaPredicted RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 POLEQ07864 2286 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 NCOA6Q14686 2063 aaPredicted RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 MED12LQ86YW9 2145 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 WNT11O96014 354 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 TACSTD2P09758 323 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 B4GALT1P15291 398 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CPEP16870 476 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ZNF182P17025 639 aaPredicted RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 PTGS2P35354 604 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ZNF84P51523 738 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 PER3P56645 1201 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms