RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SNTB1Q13884 538 aaKnown RBP29.15■■■□□ 2.26
CSNK1E-204ENST00000403904 UGT2A3Q6UWM9 527 aa29.15■■■□□ 2.26
CSNK1E-204ENST00000403904 MEPCEQ7L2J0 689 aaKnown RBP29.15■■■□□ 2.26
CSNK1E-204ENST00000403904 STEAP2Q8NFT2 490 aa29.15■■■□□ 2.26
CSNK1E-204ENST00000403904 CNIH3Q8TBE1 160 aa29.15■■■□□ 2.26
CSNK1E-204ENST00000403904 C11orf40Q8WZ69 217 aa29.15■■■□□ 2.26
CSNK1E-204ENST00000403904 NPDC1Q9NQX5 325 aaPredicted RBP29.15■■■□□ 2.26
CSNK1E-204ENST00000403904 CCDC182A6NF36 153 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 MSR1P21757 451 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 FMO3P31513 532 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 OCLNQ16625 522 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 SLC35D3Q5M8T2 416 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 GID4Q8IVV7 300 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 SKA3Q8IX90 412 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 ANKRD60Q9BZ19 345 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 MRPL22Q9NWU5 206 aaKnown RBP29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 HSPE1-MOB4S4R3N1 261 aa29.14■■■□□ 2.26
CSNK1E-204ENST00000403904 GCN1Q92616 2671 aaKnown RBP29.14■■■□□ 2.25
CSNK1E-204ENST00000403904 A0A1W2PR80 420 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 SH3D21A4FU49 640 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 CDH11P55287 796 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 NRN1LQ496H8 165 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 MEDAGQ5VYS4 303 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 BOD1Q96IK1 185 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 CLN6Q9NWW5 311 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 OR5H1A6NKK0 313 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 WBP4O75554 376 aaKnown RBP29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 FARS2O95363 451 aaKnown RBP29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 TEKQ02763 1124 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 FAM27BQ5VT28 67 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 THAP5Q7Z6K1 395 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 WDR76Q9H967 626 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 SLC17A5Q9NRA2 495 aa29.13■■■□□ 2.25
CSNK1E-204ENST00000403904 GSTT1P30711 240 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 BLVRAP53004 296 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 TUBA1BP68363 451 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 TUBA4AP68366 448 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 C22orf34Q6ZV56 151 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 TUBA1AQ71U36 451 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 C17orf78Q8N4C9 275 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 OR52N5Q8NH56 324 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 RFKQ969G6 155 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 ZNF416Q9BWM5 594 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 PRR14LQ5THK1 2151 aa29.12■■■□□ 2.25
CSNK1E-204ENST00000403904 SLC22A31A6NKX4 558 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 MYF6P23409 242 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 HOXC12P31275 282 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 CAPZA2P47755 286 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 KCNMB1Q16558 191 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 SMN1Q16637 294 aaKnown RBP29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 SLC16A14Q7RTX9 510 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 WDR31Q8NA23 367 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 CNBD2Q96M20 576 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 Q96MT0 163 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 ZNF224Q9NZL3 707 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 COMMD3-BMI1R4GMX3 469 aa29.11■■■□□ 2.25
CSNK1E-204ENST00000403904 ZNF503-AS2A6NEH8 195 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 C19orf84I3L1E1 186 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 PATE4P0C8F1 98 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 HTR1FP30939 366 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 NUDT6P53370 316 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 ENDOGQ14249 297 aaKnown RBP29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 TIMM23BQ5SRD1 257 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 LCN1P1Q5VSP4 162 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 OR10H5Q8NGA6 315 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 FGFBP3Q8TAT2 258 aa29.1■■■□□ 2.25
CSNK1E-204ENST00000403904 HLA-HP01893 362 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 HRGP04196 525 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 UBE2NP61088 152 aaKnown RBP29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 ADAM8P78325 824 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 SORDQ00796 357 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 CDK5R2Q13319 367 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 ERI1Q8IV48 349 aaKnown RBP29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 FBXO17Q96EF6 278 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 AMBNQ9NP70 447 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 ZNF823P16415 610 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 RPS27P42677 84 aaKnown RBP29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 LSM6P62312 80 aaKnown RBP29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 PIGFQ07326 219 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 TAB1Q15750 504 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 FBLIM1Q8WUP2 373 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 OR10A4Q9H209 315 aa29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 WARS2Q9UGM6 360 aaKnown RBP29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP29.09■■■□□ 2.25
CSNK1E-204ENST00000403904 UTP20O75691 2785 aaKnown RBP29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 SELENOFO60613 162 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 MRPL3P09001 348 aaKnown RBP29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 CST2P09228 141 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 HOXB1P14653 301 aaPredicted RBP29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 ALKBH2Q6NS38 261 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 P2RY8Q86VZ1 359 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 TIGD4Q8IY51 512 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 WFIKKN1Q96NZ8 548 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 INTS14Q96SY0 518 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 KCNN2Q9H2S1 579 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 Q9H521 79 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 MARCH7Q9H992 704 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 POLR1DQ9Y2S0 133 aa29.08■■■□□ 2.25
CSNK1E-204ENST00000403904 CD79AP11912 226 aa29.07■■■□□ 2.24
CSNK1E-204ENST00000403904 NAA10P41227 235 aaPredicted RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms