RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 ZNF169Q14929 603 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-203ENST00000402554 LIPNQ5VXI9 398 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 SLC18B1Q6NT16 456 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-203ENST00000402554 WDFY1Q8IWB7 410 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 CISD2Q8N5K1 135 aaKnown RBP11.66□□□□□ -0.54
NDEL1-203ENST00000402554 PARP16Q8N5Y8 322 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 OR14L1PQ8NHC6 308 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 FNDC8Q8TC99 324 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 CPT1CQ8TCG5 803 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 RPS4Y2Q8TD47 263 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 ASB17Q8WXJ9 295 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 RBP7Q96R05 134 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 UTP23Q9BRU9 249 aaKnown RBP11.66□□□□□ -0.54
NDEL1-203ENST00000402554 EMC6Q9BV81 110 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 KLHL13Q9P2N7 655 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 KCNG2Q9UJ96 466 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 CMAHPQ9Y471 501 aa11.66□□□□□ -0.54
NDEL1-203ENST00000402554 LOC102725191A0A1B0GVB3 256 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 OR5H15A6NDH6 313 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 HSPB2A8KAH6 182 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 TRAF3IP2O43734 574 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-203ENST00000402554 UPK3AO75631 287 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 RPP14O95059 124 aaKnown RBP11.65□□□□□ -0.54
NDEL1-203ENST00000402554 PSKH1P11801 424 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 ZNF12P17014 697 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 TNFSF8P32971 234 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 PTGS2P35354 604 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 CAV3P56539 151 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 CSNK2A1P68400 391 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-203ENST00000402554 HSPB2Q16082 182 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 SPINK14Q6IE38 97 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 ZNF454Q8N9F8 522 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 OR13C5Q8NGS8 318 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 SLC30A2Q9BRI3 323 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 TTYH2Q9BSA4 534 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 PPIL3Q9H2H8 161 aaKnown RBP11.65□□□□□ -0.54
NDEL1-203ENST00000402554 ZFP64Q9NPA5 681 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 DEPPQ9NTK1 212 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 ING1Q9UK53 422 aaPredicted RBP11.65□□□□□ -0.54
NDEL1-203ENST00000402554 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 ALPK2Q86TB3 2170 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 SHANK1Q9Y566 2161 aa11.65□□□□□ -0.54
NDEL1-203ENST00000402554 CNTRLQ7Z7A1 2325 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 EIF1BO60739 113 aaKnown RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 NCR1O76036 304 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 IGHG1P01857 330 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 ZNF823P16415 610 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 ZNF43P17038 809 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 CFL1P23528 166 aaKnown RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 B3GALT5-AS1P59052 145 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 NANOS3P60323 173 aaKnown RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 RGS21Q2M5E4 152 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 ZMAT1Q5H9K5 638 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 FAM27D1Q5T7N8 215 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 DDI2Q5TDH0 399 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 OTPQ5XKR4 325 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 YRDCQ86U90 279 aaKnown RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 TPRA1Q86W33 373 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 LAX1Q8IWV1 398 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 SLC26A10Q8NG04 563 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 HAS2Q92819 552 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 SNRNP40Q96DI7 357 aaKnown RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 WDFY2Q96P53 400 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 AMELYQ99218 206 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 PDCD1LG2Q9BQ51 273 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 NAA11Q9BSU3 229 aaPredicted RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 MRPL13Q9BYD1 178 aaKnown RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 ASF1BQ9NVP2 202 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 BOKQ9UMX3 212 aaPredicted RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 ZNF281Q9Y2X9 895 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 MRPS18CQ9Y3D5 142 aaKnown RBP11.64□□□□□ -0.55
NDEL1-203ENST00000402554 RELNP78509 3460 aa11.64□□□□□ -0.55
NDEL1-203ENST00000402554 SLC35F4A4IF30 521 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 LOC110117498-PIK3R3F6TDL0 507 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 J3QKU1 62 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 RAMP1O60894 148 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 GATBO75879 557 aaKnown RBP11.63□□□□□ -0.55
NDEL1-203ENST00000402554 NEURL1O76050 574 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 RFPL3SP0C7P2 107 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 CLRN1P58418 232 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 RPS11P62280 158 aaKnown RBP eCLIP11.63□□□□□ -0.55
NDEL1-203ENST00000402554 H3F3AP84243 136 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 PMP22Q01453 160 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 CAMK2DQ13557 499 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 ALKBH1Q13686 389 aaKnown RBP11.63□□□□□ -0.55
NDEL1-203ENST00000402554 EIF2B1Q14232 305 aaKnown RBP11.63□□□□□ -0.55
NDEL1-203ENST00000402554 OR1C1Q15619 314 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 MEP1BQ16820 701 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 THEM4Q5T1C6 240 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 NOXO1Q8NFA2 376 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 OR6X1Q8NH79 312 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 NSMAFQ92636 917 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 SLC25A44Q96H78 314 aaPredicted RBP11.63□□□□□ -0.55
NDEL1-203ENST00000402554 OR8B4Q96RC9 309 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 FAM173AQ9BQD7 235 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 RNF32Q9H0A6 362 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 ABCB9Q9NP78 766 aa11.63□□□□□ -0.55
NDEL1-203ENST00000402554 SLCO1C1Q9NYB5 712 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms