RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 STK11Q15831 433 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 LRRN1Q6UXK5 716 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 Q6ZS92 163 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 PXKQ7Z7A4 578 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 ZNF566Q969W8 418 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 INTS12Q96CB8 462 aaKnown RBP10.36□□□□□ -0.75
SKA3-203ENST00000400018 C4orf36Q96KX1 117 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 GPX7Q96SL4 187 aaPredicted RBP10.36□□□□□ -0.75
SKA3-203ENST00000400018 NMNAT2Q9BZQ4 307 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 EVA1AQ9H8M9 152 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 SPIN1Q9Y657 262 aaPredicted RBP10.36□□□□□ -0.75
SKA3-203ENST00000400018 A6NIN4 97 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ZNF716A6NP11 495 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 PYCARD-AS1I3L0S3 204 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 PMS2P2O95744 297 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 TPOP07202 933 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 RAC3P60763 192 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 VBP1P61758 197 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 MADCAM1Q13477 382 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ESPNLQ6ZVH7 1005 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 PRSS48Q7RTY5 328 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 RDH10Q8IZV5 341 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 OR6N1Q8NGY5 312 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 MCHR2Q969V1 340 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 SNRNP40Q96DI7 357 aaKnown RBP10.35□□□□□ -0.75
SKA3-203ENST00000400018 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 TEX12Q9BXU0 123 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ACOXLQ9NUZ1 547 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 PRSS50Q9UI38 385 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 TINAGQ9UJW2 476 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 FLVCR1Q9Y5Y0 555 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 DAPL1A0PJW8 107 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 FAM172BPA6NC97 362 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ZNF593O00488 134 aaPredicted RBP10.35□□□□□ -0.75
SKA3-203ENST00000400018 SLC2A1P11166 492 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ZNF17P17021 662 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 DLX5P56178 289 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 NCS1P62166 190 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ADAM8P78325 824 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 SGCAQ16586 387 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 TIGD6Q17RP2 521 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ARMCX4Q5H9R4 360 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 EMC4Q5J8M3 183 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 FAM27D1Q5T7N8 215 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 RPL13AP3Q6NVV1 102 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 SLC51BQ86UW2 128 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ASCC1Q8N9N2 400 aaKnown RBP10.35□□□□□ -0.75
SKA3-203ENST00000400018 FGFBP3Q8TAT2 258 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 SLC25A43Q8WUT9 341 aaPredicted RBP10.35□□□□□ -0.75
SKA3-203ENST00000400018 RORBQ92753 470 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 Q96MT0 163 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 OXGR1Q96P68 337 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 CITED4Q96RK1 184 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ALG8Q9BVK2 526 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 FUNDC2Q9BWH2 189 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 CRLF2Q9HC73 371 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ERVK13-1Q9NX77 482 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 FBXL3Q9UKT7 428 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 GTF2A1LQ9UNN4 478 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ASH1LQ9NR48 2969 aaKnown RBP10.35□□□□□ -0.75
SKA3-203ENST00000400018 C5orf63A6NC05 138 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ZNF726A6NNF4 738 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 H3BUI4 141 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 RAB36O95755 333 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 RENP00797 406 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 PGA4P0DJD7 388 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 PGA3P0DJD8 388 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 ABOP16442 354 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 S100A5P33763 92 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 TTKP33981 857 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 GALK2Q01415 458 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 SNTB1Q13884 538 aaKnown RBP10.35□□□□□ -0.75
SKA3-203ENST00000400018 SSX1Q16384 188 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 TSPO2Q5TGU0 170 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 CNEP1R1Q8N9A8 125 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 MYDGFQ969H8 173 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 OR2M2Q96R28 347 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 RNF32Q9H0A6 362 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 HMG20AQ9NP66 347 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 PLCXD1Q9NUJ7 323 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 KCNN3Q9UGI6 736 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 GNG8Q9UK08 70 aa10.35□□□□□ -0.75
SKA3-203ENST00000400018 IGLV1-36A0A0B4J1U3 117 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 ZNF99A8MXY4 864 aaPredicted RBP10.34□□□□□ -0.75
SKA3-203ENST00000400018 MPZL2O60487 215 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 B4GALT1P15291 398 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 CTRB1P17538 263 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 GADD45AP24522 165 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 CTRB2Q6GPI1 263 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 NAA40Q86UY6 237 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.34□□□□□ -0.75
SKA3-203ENST00000400018 MINDY2Q8NBR6 621 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 MGLLQ99685 303 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 TMED9Q9BVK6 235 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 SNTNA6NMZ2 147 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 MYL12BO14950 172 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 RER1O15258 196 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 PRKACAP17612 351 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 CELP19835 753 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms