RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 GNRHRP30968 328 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 MESP2Q0VG99 397 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 GLRX5Q86SX6 157 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF283Q8N7M2 679 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 HSD17B11Q8NBQ5 300 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 OR4K15Q8NH41 348 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC37A2Q8TED4 501 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 RASD2Q96D21 266 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 PIGQQ9BRB3 760 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 TAF9BQ9HBM6 251 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 FAM96BQ9Y3D0 163 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 RLFQ13129 1914 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 SYT7O43581 403 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 CEACAM5P06731 702 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 HEXBP07686 556 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 SPP1P10451 314 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 ICAM2P13598 275 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 EMP2P54851 167 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 PCBP3P57721 371 aaKnown RBP13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 FXYD4P59646 89 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 HIST2H3PS2Q5TEC6 136 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC2A12Q8TD20 617 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 FGF14Q92915 247 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF251Q9BRH9 671 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 ADAT1Q9BUB4 502 aaKnown RBP13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 CGGBP1Q9UFW8 167 aaPredicted RBP13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 TRAV1-2A0A0B4J238 106 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 TMEM212A6NML5 194 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 CXCL2P19875 107 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 HNRNPKP61978 463 aaKnown RBP eCLIP13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 SMAD2Q15796 467 aaKnown RBP13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF626Q68DY1 528 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 UQCC3Q6UW78 93 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 CLEC9AQ6UXN8 241 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 HIST2H3AQ71DI3 136 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 RHOFQ9HBH0 211 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 IL20Q9NYY1 176 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 ADAM18Q9Y3Q7 739 aa13.33□□□□□ -0.27
RPRD1A-202ENST00000399022 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM218A2RU14 115 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 HMSDA8MTL9 139 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 CRTAPO75718 401 aaPredicted RBP13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 CRYBA1P05813 215 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 CISD3P0C7P0 127 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 SERPINF1P36955 418 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 RSU1Q15404 277 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM184AQ6ZMB5 413 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 MAMSTRQ6ZN01 415 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 RNF165Q6ZSG1 346 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 SCGB1C1Q8TD33 95 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 NPRL2Q8WTW4 380 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 MIB2Q96AX9 1013 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 LINC00615Q96LM1 132 aaPredicted RBP13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 Q96M85 177 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 RPP25Q9BUL9 199 aaKnown RBP13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 TOLLIPQ9H0E2 274 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 DAPP1Q9UN19 280 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 FBXO7Q9Y3I1 522 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 RHBDD3Q9Y3P4 386 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 LOC100289279A0A1B0GTE1 492 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 HYAL3O43820 417 aaPredicted RBP13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 AGFG1P52594 562 aaKnown RBP13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 ACTBL2Q562R1 376 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 B3GNTL1Q67FW5 361 aaPredicted RBP13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF836Q6ZNA1 936 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 OR14A16Q8NHC5 309 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 TERB2Q8NHR7 220 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 SCN3AQ9NY46 2000 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM235A6NFC5 223 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 SLC16A7O60669 478 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 PGCP20142 388 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 AGERQ15109 404 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 C9orf50Q5SZB4 431 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM91Q6ZNR0 172 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 TMEM156Q8N614 296 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 OR6N1Q8NGY5 312 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 ZG16BQ96DA0 208 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 TUBG2Q9NRH3 451 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 CA10Q9NS85 328 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF337Q9Y3M9 751 aa13.33□□□□□ -0.28
RPRD1A-202ENST00000399022 SLC33A1O00400 549 aaPredicted RBP13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 HIST1H1CP16403 213 aaKnown RBP13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 CARD17Q5XLA6 110 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 STAC2Q6ZMT1 411 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 ZNF793Q6ZN11 406 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 Q6ZRG5 221 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 OVCH2Q7RTZ1 564 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 LINC01555Q8NAE3 123 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 RSC1A1Q92681 617 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 SDF2Q99470 211 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 MAP3K3Q99759 626 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 NELFAQ9H3P2 528 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 OPN4Q9UHM6 478 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 DUX1O43812 170 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 FGF17O60258 216 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 CYTIPO60759 359 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 OR2C1O95371 312 aa13.32□□□□□ -0.28
RPRD1A-202ENST00000399022 IFNA5P01569 189 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms