RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ZBED5Q49AG3 693 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 PABPC1L2AQ5JQF8 200 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 FAM27BQ5VT28 67 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 CLDN22Q8N7P3 220 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 ARIH2OSQ8N7S6 290 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 FAM156AQ8NDB6 213 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 ICA1LQ8NDH6 482 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 ZNF519Q8TB69 540 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 SYNPRQ8TBG9 265 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 MSI2Q96DH6 328 aaKnown RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 BEX2Q9BXY8 128 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 SHARPINQ9H0F6 387 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 DCAF13Q9NV06 445 aaKnown RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 GRHPRQ9UBQ7 328 aa11.5□□□□□ -0.57
VCX3A-202ENST00000398729 SAMD4AQ9UPU9 718 aaKnown RBP11.5□□□□□ -0.57
VCX3A-202ENST00000398729 A0A1W2PPL8 197 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 A0A1W2PRQ8 180 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 LRP5LA4QPB2 252 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 LYNX1G3V0Z9 82 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 XKRYO14609 159 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 CDC42EP2O14613 210 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 CD14P08571 375 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 TACSTD2P09758 323 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 LYNX1P0DP58 116 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 NAT2P11245 290 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 ZNF250P15622 560 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 RHCEP18577 417 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 CCNOP22674 350 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 LAP3P28838 519 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 PCBD1P61457 104 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 ERVS71-1P61550 626 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 ERVK-25P63136 954 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 RIN1Q13671 783 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 DGCR6Q14129 220 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 FGD3Q5JSP0 725 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 UNQ6126/PRO20091Q6UXV3 157 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 TSEN54Q7Z6J9 526 aaKnown RBP11.49□□□□□ -0.57
VCX3A-202ENST00000398729 ALDH16A1Q8IZ83 802 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 RNF148Q8N7C7 305 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 SLC7A13Q8TCU3 470 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 SNX33Q8WV41 574 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 SLCO1C1Q9NYB5 712 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 NDUFAF4Q9P032 175 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 TAAR3PQ9P1P4 343 aa11.49□□□□□ -0.57
VCX3A-202ENST00000398729 EIF3KQ9UBQ5 218 aaKnown RBP11.49□□□□□ -0.57
VCX3A-202ENST00000398729 IGLV3-9A0A075B6K5 115 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 AHCYL1O43865 530 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 LILRA1O75019 489 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 CLPTM1O96005 669 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 TGFAP01135 160 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 HPXP02790 462 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 CST2P09228 141 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 ACHEP22303 614 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 GDI2P50395 445 aaKnown RBP11.48□□□□□ -0.57
VCX3A-202ENST00000398729 PSG4Q00888 419 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 KRT72Q14CN4 511 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 MOGQ16653 247 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 ALKBH6Q3KRA9 238 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 TMEM154Q6P9G4 183 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 FOXL2NBQ6ZUU3 175 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 OR1J1Q8NGS3 322 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 AKR7LQ8NHP1 331 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 RDH5Q92781 318 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 HPS1Q92902 700 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 FAM46AQ96IP4 442 aaKnown RBP11.48□□□□□ -0.57
VCX3A-202ENST00000398729 POM121L2Q96KW2 1035 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 ZNF570Q96NI8 536 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 SNX18Q96RF0 628 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 C19orf24Q9BVV8 132 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 OR2H1Q9GZK4 316 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 GORASP2Q9H8Y8 452 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 KRCC1Q9NPI7 259 aaPredicted RBP11.48□□□□□ -0.57
VCX3A-202ENST00000398729 HINT3Q9NQE9 182 aaKnown RBP11.48□□□□□ -0.57
VCX3A-202ENST00000398729 MAGEL2Q9UJ55 1249 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 ADAM18Q9Y3Q7 739 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 TIMM10BQ9Y5J6 103 aa11.48□□□□□ -0.57
VCX3A-202ENST00000398729 MGAM2Q2M2H8 2515 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 C5orf49A4QMS7 147 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 C12orf71A8MTZ7 269 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 C17orf100A8MU93 164 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 H7C1C5 153 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 NDUFB2O95178 105 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 MT-ND5P03915 603 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 ITGA2P17301 1181 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 MSR1P21757 451 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 IGFBP5P24593 272 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 THBS2P35442 1172 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 LCN6P62502 163 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 GNGT1P63211 74 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 MRPS11P82912 194 aaKnown RBP11.47□□□□□ -0.57
VCX3A-202ENST00000398729 PCGF3Q3KNV8 242 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 SAMD4BQ5PRF9 694 aaKnown RBP11.47□□□□□ -0.57
VCX3A-202ENST00000398729 UGT2A3Q6UWM9 527 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 FAM122BQ7Z309 247 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 SYT9Q86SS6 491 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 PGAM4Q8N0Y7 254 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms