RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CTDSP2O14595 271 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 GABARAPO95166 117 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 OR2T7P0C7T2 308 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 NPPBP16860 134 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 MFGE8Q08431 387 aaPredicted RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 C1orf140Q5VVS0 124 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 OGFOD3Q6PK18 319 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 C5orf46Q6UWT4 87 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 OR2T27Q8NH04 317 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 NRIP3Q9NQ35 241 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 TMEM82A0PJX8 343 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC22A23A1A5C7 686 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 MEIOCA2RUB1 952 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 PHF1O43189 567 aaPredicted RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 SCAF4O95104 1147 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 CRYBA1P05813 215 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 SERPINF1P36955 418 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 LYRM4Q9HD34 91 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 ZC3H12DA2A288 527 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 AQP7O14520 342 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 OR2J2O76002 312 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 POLR2IP36954 125 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 GSK3AP49840 483 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 PEA15Q15121 130 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 ELAVL1Q15717 326 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 FJX1Q86VR8 437 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 SUMF1Q8NBK3 374 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 TSSK2Q96PF2 358 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 C17orf112F2Z3M2 114 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 ELAVL4P26378 380 aaKnown RBP13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 PHLDA2Q53GA4 152 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 TRMT12Q53H54 448 aaKnown RBP13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 DPY19L2P2Q6ZN68 376 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 MRGPRX3Q96LB0 322 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 PLA2G3Q9NZ20 509 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 COPS3Q9UNS2 423 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 M0QYG6 137 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 NSA2O95478 260 aaKnown RBP13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF93P35789 620 aaPredicted RBP13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 EBPQ15125 230 aaKnown RBP13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 STPG1Q5TH74 334 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 C1orf123Q9NWV4 160 aa13.02□□□□□ -0.32
PCDHA11-201ENST00000398640 SPAARA0A1B0GVQ0 90 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 ZNF728P0DKX0 622 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 NFYAP23511 347 aaPredicted RBP13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 BTG2P78543 158 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 OR6T1Q8NGN1 323 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 A8MVM7 634 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 DEGS1O15121 323 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 SPINT2O43291 252 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 RNF4P78317 190 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 MFSD12Q6NUT3 480 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 SPNS2Q8IVW8 549 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 OPA3Q9H6K4 179 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 A4GALTQ9NPC4 353 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 FBXL2Q9UKC9 423 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 OR52A1Q9UKL2 312 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 ZNF705GA8MUZ8 300 aaPredicted RBP13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 H0YIG0 161 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 SMLR1H3BR10 107 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 CLINT1Q14677 625 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 MAVSQ7Z434 540 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 PCNPQ8WW12 178 aaKnown RBP13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 RPL3LQ92901 407 aaKnown RBP13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 SEMA4CQ9C0C4 833 aa13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 PUS1Q9Y606 427 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCDHA11-201ENST00000398640 CRYM-AS1A6NIL9 109 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 HRO43593 1189 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 FADS1O60427 444 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 METAP1P53582 386 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 HCCSP53701 268 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 ALKBH1Q13686 389 aaKnown RBP13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 IL34Q6ZMJ4 242 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 OR10X1Q8NGY0 326 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 NIPSNAP1Q9BPW8 284 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 NIPAL2Q9H841 368 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 NT5DC2Q9H857 520 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 GPR173Q9NS66 373 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 TNFRSF19Q9NS68 423 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 TXNL4BQ9NX01 149 aaKnown RBP13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 PMS2P1A4D2B8 440 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 SP9P0CG40 484 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 PRKACAP17612 351 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 P2RX1P51575 399 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 LAX1Q8IWV1 398 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 MAML2Q8IZL2 1156 aaPredicted RBP13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 TECTBQ96PL2 329 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 ABHD6Q9BV23 337 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 SARGQ9BW04 601 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 AMBRA1Q9C0C7 1298 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 CHST8Q9H2A9 424 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 SLA2Q9H6Q3 261 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 EMC7Q9NPA0 242 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 I6L893 689 aaPredicted RBP13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 PLPP1O14494 284 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 MGST1P10620 155 aaKnown RBP13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 L3MBTL4Q8NA19 623 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 C5orf49A4QMS7 147 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 H0Y8G0 127 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms