RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 IL32P24001 234 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 TMEM81Q6P7N7 255 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 DOK3Q7L591 496 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 PRSS41Q7RTY9 318 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR1J2Q8NGS2 313 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 LRRC3BQ96PB8 259 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 OBP2BQ9NPH6 170 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 CGGBP1Q9UFW8 167 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 IGHV1OR15-9A0A0B4J2B8 117 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 PRAMEF4O60810 478 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 HOXB5P09067 269 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 TPT1P13693 172 aaKnown RBP12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 KIR2DL1P43626 348 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 CDK5Q00535 292 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 PRAMEF9Q5VWM5 478 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 ABI3BPQ7Z7G0 1075 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR4C3Q8NH37 302 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR1S1Q8NH92 325 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 C17orf50Q8WW18 174 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 HSD17B8Q92506 261 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZG16BQ96DA0 208 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLAMF6Q96DU3 332 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 MOB1AQ9H8S9 216 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 SIGLEC7Q9Y286 467 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 MRPS2Q9Y399 296 aaKnown RBP12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZNF780AO75290 641 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 QDPRP09417 244 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 SOX18P35713 384 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 EVX1P49640 407 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 XAF1Q6GPH4 301 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 KIAA0907Q7Z7F0 614 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 CADM3Q8N126 398 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 CARFQ8N187 725 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 IL1F10Q8WWZ1 152 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC7A6Q92536 515 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 HINT2Q9BX68 163 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 ASH2LQ9UBL3 628 aa12.95□□□□□ -0.34
PCDHGA11-201ENST00000398587 MCRIP1C9JLW8 97 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 MAGEB4O15481 346 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 SGCEO43556 437 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 TNFSF4P23510 183 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 CCR6P51684 374 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZNF169Q14929 603 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 GLIPR1L1Q6UWM5 242 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 YRDCQ86U90 279 aaKnown RBP12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR4Q3Q8NH05 313 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 GLYATL2Q8WU03 294 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 MUCL1Q96DR8 90 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 TMEM43Q9BTV4 400 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 IGHV1OR21-1A0A087WYE8 117 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC22A23A1A5C7 686 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 AIPO00170 330 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 TBXA2RP21731 343 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 PRICKLE4Q2TBC4 344 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 HLA-BQ31612 363 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 CD300LDQ6UXZ3 194 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 EMC7Q9NPA0 242 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 PARP14Q460N5 1801 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 IGHV5-51A0A0C4DH38 117 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 SMCO3A2RU48 225 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 IMPA2O14732 288 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 FABP7O15540 132 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 TSPAN15O95858 294 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 SSTR2P30874 369 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 TAS2R20P59543 309 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC9A3R2Q15599 337 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 PRSS45Q7RTY3 260 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 TSPAN10Q9H1Z9 355 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZMAT3Q9HA38 289 aaKnown RBP12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 AKIP1Q9NQ31 210 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 GLTPQ9NZD2 209 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 SCN10AQ9Y5Y9 1956 aa12.94□□□□□ -0.34
PCDHGA11-201ENST00000398587 OTOL1A6NHN0 477 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 PCP4L1A6NKN8 68 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 IGHA2P01877 340 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 LAP3P28838 519 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 PMPCAQ10713 525 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 AKR1C8PQ5T2L2 129 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 GDPD3Q7L5L3 318 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 LILRB2Q8N423 598 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 LIPHQ8WWY8 451 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 UNKLQ9H9P5 680 aaKnown RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC22A11Q9NSA0 550 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 MED29Q9NX70 200 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 MYF5P13349 255 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 RPS27P42677 84 aaKnown RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 SORDQ00796 357 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 DOC2BQ14184 412 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 RBM39Q14498 530 aaKnown RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 OXGR1Q96P68 337 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZNF436Q9C0F3 470 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 CTSFQ9UBX1 484 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 CD300LBA8K4G0 201 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 ABOP16442 354 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 S100A2P29034 98 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 CCL7P80098 99 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 ASF1BQ9NVP2 202 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 GPR160Q9UJ42 338 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms