RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 NAP1L6A6NFF2 107 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 MT-CO3P00414 261 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 MRPL58Q14197 206 aaKnown RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 CXorf67Q86X51 503 aaPredicted RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 MORN4Q8NDC4 146 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 OR51F2Q8NH61 342 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 NRG4Q8WWG1 115 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 BSCL2Q96G97 398 aaPredicted RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 MFFQ9GZY8 342 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 ACOXLQ9NUZ1 547 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 GNG13Q9P2W3 67 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 OSGIN1Q9UJX0 560 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 PPP1R3CQ9UQK1 317 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 DOCK1Q14185 1865 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 C17orf112F2Z3M2 114 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 H0Y8G0 127 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 H7C1Q1 480 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 DVL1O14640 695 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 DVL1P1P54792 670 aaPredicted RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 ASTLQ6HA08 431 aaPredicted RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 LAX1Q8IWV1 398 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 NECAP2Q9NVZ3 263 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 SERGEFQ9UGK8 458 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ARNTP27540 789 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ANGPTL5Q86XS5 388 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ADAMTS14Q8WXS8 1223 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ARL11Q969Q4 196 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 HYLS1Q96M11 299 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 OR51J1Q9H342 316 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 MED29Q9NX70 200 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 TIMM10BQ9Y5J6 103 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 H0YIG0 161 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 PIGAP37287 484 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 EMDP50402 254 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 CLINT1Q14677 625 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 SDF2Q99470 211 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ZNF346Q9UL40 294 aaKnown RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 CRYBA1P05813 215 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 MRPS10P82664 201 aaKnown RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 RETREG3Q86VR2 466 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 OR51H1Q8NH63 302 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ZPBPQ9BS86 351 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 MED17Q9NVC6 651 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ASB4Q9Y574 426 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 TMPRSS11DO60235 418 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 EIF4E2O60573 245 aaKnown RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 B4GALT1P15291 398 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 BMP5P22003 454 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 EGFL6Q8IUX8 553 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 M0R296 226 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 SERPINF1P36955 418 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 GABRA4P48169 554 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 MRPL19P49406 292 aaKnown RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 GCNT2Q8N0V5 402 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 FBXL6Q8N531 539 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 PDFQ9HBH1 243 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 TPT1P13693 172 aaKnown RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 ARR3P36575 388 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 HES3Q5TGS1 186 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 OR52I1Q8NGK6 324 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ZNF583Q96ND8 569 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 SERTM1A2A2V5 107 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 POM121CA8CG34 1229 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 RAB40ALP0C0E4 278 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 SORDQ00796 357 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 DUSP7Q16829 419 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 TMPRSS7Q7RTY8 843 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 FJX1Q86VR8 437 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 RAB40AQ8WXH6 277 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 PINX1Q96BK5 328 aaKnown RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 HEYLQ9NQ87 328 aaPredicted RBP10.37□□□□□ -0.75
TTC28-201ENST00000397906 B4GALT3O60512 393 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 SPNS2Q8IVW8 549 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 SPACA5Q96QH8 159 aa10.37□□□□□ -0.75
TTC28-201ENST00000397906 ALPLP05186 524 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 POU2F2P09086 479 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 OR51D1Q8NGF3 324 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 SEC22AQ96IW7 307 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 TMEM82A0PJX8 343 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 LMO7DNF2Z398 122 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 ZNF195O14628 629 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 OR10J4P0C629 311 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 HIST1H1CP16403 213 aaKnown RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 BCKDHBP21953 392 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 CLN3Q13286 438 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 SAXO2Q658L1 398 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 SFXN4Q6P4A7 337 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 SPRY3O43610 288 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 HSBP1L1C9JCN9 74 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 GLCEO94923 617 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 POLR2IP36954 125 aaKnown RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 NPY4RP50391 375 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 PARP16Q8N5Y8 322 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 FAM3DQ96BQ1 224 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 A0A1W2PS29 197 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 HTR1FP30939 366 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 INSM1Q01101 510 aaPredicted RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 ENTHD1Q8IYW4 607 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 NDRG4Q9ULP0 352 aaKnown RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 A0A0B4J2A0 478 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms