RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMEM14AQ9Y6G1 99 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 hCG_1807616A0A1W2PRN6 198 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FADS1O60427 444 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SPARCP09486 303 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ANXA3P12429 323 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GLB1P16278 677 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 IL11P20809 199 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 POLR2HP52434 150 aaKnown RBP16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 RPL27P61353 136 aaKnown RBP16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ZNF169Q14929 603 aaPredicted RBP16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 C1orf140Q5VVS0 124 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GLB1L2Q8IW92 636 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GPR148Q8TDV2 347 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 HAVCR1Q96D42 359 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR10A4Q9H209 315 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SDHAF2Q9NX18 166 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC22A13Q9Y226 551 aa16.52■□□□□ 0.24
CHRFAM7A-202ENST00000397827 NUP210LQ5VU65 1888 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TMEM212A6NML5 194 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SSNA1O43805 119 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 WDPCPO95876 746 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PLATP00750 562 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 GIMD1P0DJR0 217 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CALCBP10092 127 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CTLA4P16410 223 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF441Q8N8Z8 693 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 GPR119Q8TDV5 335 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MIB2Q96AX9 1013 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 C4orf45Q96LM5 186 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 DCBLD2Q96PD2 775 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CHRDQ9H2X0 955 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SLC22A11Q9NSA0 550 aa16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MRPL22Q9NWU5 206 aaKnown RBP16.52■□□□□ 0.23
CHRFAM7A-202ENST00000397827 GPR171O14626 319 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF354AO60765 605 aaPredicted RBP16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 NPIPB7O75200 414 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 FBXO45P0C2W1 286 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 HLA-DOBP13765 273 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 DCTDP32321 178 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 VEGFCP49767 419 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 BLVRAP53004 296 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MDGA2Q7Z553 956 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF417Q8TAU3 575 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF519Q8TB69 540 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TSEN15Q8WW01 171 aaKnown RBP16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF587Q96SQ5 575 aaPredicted RBP16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PLEKHA1Q9HB21 404 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 EMC7Q9NPA0 242 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SLC39A1Q9NY26 324 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TAS2R10Q9NYW0 307 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 COL5A1P20908 1838 aaPredicted RBP16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SLC22A23A1A5C7 686 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 F8W036 122 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 OR6A2O95222 327 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 WNT11O96014 354 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PNPP00491 289 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 RAB40ALP0C0E4 278 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CCKBRP32239 447 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MAMSTRQ6ZN01 415 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 RAB40AQ8WXH6 277 aa16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ATXN7L1Q9ULK2 861 aaPredicted RBP16.51■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TRBV5-7A0A0A0MS05 114 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 A8MVM7 634 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 BCAT2O15382 392 aaPredicted RBP16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MPZL1O95297 269 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MT-ATP6P00846 226 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 LCN1P31025 176 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TAS2R20P59543 309 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 FLI1Q01543 452 aaPredicted RBP16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 LGALSLQ3ZCW2 172 aaPredicted RBP16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 C17orf107Q6ZR85 190 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TMPRSS9Q7Z410 1059 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 OR8B4Q96RC9 309 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MNTQ99583 582 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 KCNK15Q9H427 330 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 AKAP7Q9P0M2 348 aaPredicted RBP16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 FRYLO94915 3013 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PEX14O75381 377 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PSMB1P20618 241 aaKnown RBP16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 HOXA1P49639 335 aaPredicted RBP16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 RNF4P78317 190 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ADAM8P78325 824 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 OR7E24Q6IFN5 339 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 COX15Q7KZN9 410 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 GRINAQ7Z429 371 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SLC38A9Q8NBW4 561 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 STT3BQ8TCJ2 826 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 WBP1Q96G27 269 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PCED1AQ9H1Q7 454 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MAB21L2Q9Y586 359 aa16.5■□□□□ 0.23
CHRFAM7A-202ENST00000397827 DXOO77932 396 aaKnown RBP16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 HRGP04196 525 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 FBXW4P57775 412 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 RASGEF1BQ0VAM2 473 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SLC17A1Q14916 467 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 OR51D1Q8NGF3 324 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ACTR6Q9GZN1 396 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TXNIPQ9H3M7 391 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 GLS2Q9UI32 602 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MRPS17Q9Y2R5 130 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms