RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TNFRSF13CQ96RJ3 184 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 TAAR2Q9P1P5 351 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 DNAJC15Q9Y5T4 150 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 SLCO1B1Q9Y6L6 691 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 IGHV3-20A0A0C4DH32 117 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 NME4O00746 187 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 HNRNPA1P09651 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMU1-201ENST00000397149 PCGF2P35227 344 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 STUMQ69YW2 141 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMU1-201ENST00000397149 ZNF534Q76KX8 674 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 MARC2Q969Z3 335 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 ZNF300Q96RE9 604 aaPredicted RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 PAAF1Q9BRP4 392 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 WASHC3Q9Y3C0 194 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 TMEM212A6NML5 194 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 HSBP1O75506 76 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 OR2F2O95006 317 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 KHSRPQ92945 711 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMU1-201ENST00000397149 WDR76Q9H967 626 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 NDRG3Q9UGV2 375 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 CTDSP2O14595 271 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 PAX5Q02548 391 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 ENDOGQ14249 297 aaKnown RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 FRMPD2BQ6IN97 320 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 DCXRQ7Z4W1 244 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 OR10P1Q8NGE3 313 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 OR1J1Q8NGS3 322 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 ZNF764Q96H86 408 aaPredicted RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 OR5M11Q96RB7 305 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 RTL8AQ9BWD3 113 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 ESRP2Q9H6T0 727 aaKnown RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 FPR3P25089 353 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 PCSK6P29122 969 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 ASCL1P50553 236 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 RPS25P62851 125 aaKnown RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 DGAT2L6Q6ZPD8 337 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 TMEM179BQ7Z7N9 219 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 OR1N1Q8NGS0 311 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 ST8SIA4Q92187 359 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 CPPED1Q9BRF8 314 aaPredicted RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 EMC6Q9BV81 110 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 MRIQ9BWK5 157 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 ACTR3CQ9C0K3 210 aaPredicted RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 IL23AQ9NPF7 189 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 C21orf62-AS1Q17RA5 79 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 DMRTC1Q5HYR2 192 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 PDZD3Q86UT5 571 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 SLC22A24Q8N4F4 322 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 CD200R1Q8TD46 325 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 FUBP1Q96AE4 644 aaKnown RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 CRISPLD2Q9H0B8 497 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 MED17Q9NVC6 651 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 MRPS2Q9Y399 296 aaKnown RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 TMED7Q9Y3B3 224 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 BLACEA4D250 179 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 FAM189A1O60320 539 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ALOX12BO75342 701 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 NAGAP17050 411 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 IRS1P35568 1242 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 KCNJ10P78508 379 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 REEP5Q00765 189 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 TAZQ16635 292 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ACOT6Q3I5F7 207 aaPredicted RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 YOD1Q5VVQ6 348 aaPredicted RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 MRPL10Q7Z7H8 261 aaKnown RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 LAX1Q8IWV1 398 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ETFBKMTQ8IXQ9 262 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 FIBINQ8TAL6 211 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 BCL2L2Q92843 193 aaPredicted RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 AAMDCQ9H7C9 122 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 SIX4Q9UIU6 781 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 CSAG2Q9Y5P2 127 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 FITM1A5D6W6 292 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ZNF195O14628 629 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 SH2D1BO14796 132 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ZNF623O75123 536 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 CEBPBP17676 345 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 SDC1P18827 310 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 SRP9P49458 86 aaKnown RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 HOXA4Q00056 320 aaPredicted RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 MARCH3Q86UD3 253 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 FOXQ1Q9C009 403 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ENTPD2Q9Y5L3 495 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 A0A1W2PRD5 423 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 A0A1W2PRF3 423 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 A0A1W2PRM7 423 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 HOXA10P31260 410 aaPredicted RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 TGFBR1P36897 503 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 DTWD1Q8N5C7 304 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 GHSRQ92847 366 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 RASD2Q96D21 266 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 SEMA4GQ9NTN9 838 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms