RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 MKRN2OSH3BPM6 223 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF182P17025 639 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-204ENST00000396548 CELP19835 753 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 FGF9P31371 208 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-204ENST00000396548 CSNK1A1P48729 337 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 TAS2R43P59537 309 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 NANOS3P60323 173 aaKnown RBP11.24□□□□□ -0.61
TRIM39-204ENST00000396548 SIRPAP78324 504 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 LSAMPQ13449 338 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 LINC00303Q3SY05 128 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 LRRC69Q6ZNQ3 347 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 FNDC9Q8TBE3 224 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 SNX33Q8WV41 574 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 MAP6Q96JE9 813 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 OR8B4Q96RC9 309 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 TM9SF2Q99805 663 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 CHCHD6Q9BRQ6 235 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 ABHD6Q9BV23 337 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 B3GNT3Q9Y2A9 372 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 LHFPL6Q9Y693 200 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 PMF1-BGLAPU3KQ54 211 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 NOL3O60936 208 aaKnown RBP11.24□□□□□ -0.61
TRIM39-204ENST00000396548 EDNRAP25101 427 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 CDAP32320 146 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 CDK5R1Q15078 307 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 FDX2Q6P4F2 183 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 OR10S1Q8NGN2 331 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF837Q96EG3 531 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-204ENST00000396548 POLE4Q9NR33 117 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 TXNL4BQ9NX01 149 aaKnown RBP11.24□□□□□ -0.61
TRIM39-204ENST00000396548 GNG8Q9UK08 70 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 TP53TG5Q9Y2B4 290 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 APC2O95996 2303 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 TRDV1A0A1B0GX56 115 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 HLA-DQA2P01906 255 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 PAX7P23759 505 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 PSMA1P25786 263 aaKnown RBP11.23□□□□□ -0.61
TRIM39-204ENST00000396548 UCNP55089 124 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 RPS11P62280 158 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF324BQ6AW86 544 aaPredicted RBP11.23□□□□□ -0.61
TRIM39-204ENST00000396548 RPL22L1Q6P5R6 122 aaKnown RBP11.23□□□□□ -0.61
TRIM39-204ENST00000396548 PLEKHG7Q6ZR37 379 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 EXTL1Q92935 676 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF775Q96BV0 537 aaPredicted RBP11.23□□□□□ -0.61
TRIM39-204ENST00000396548 SMIM19Q96E16 107 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 CLCF1Q9UBD9 225 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 ZZEF1O43149 2961 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 PHF3Q92576 2039 aaKnown RBP11.23□□□□□ -0.61
TRIM39-204ENST00000396548 PNMA8CA0A1B0GUJ8 204 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 HSPB2A8KAH6 182 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 PSMD9O00233 223 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 TGM6O95932 706 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 OR8G3PP0DMU2 310 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 GUSBP1Q15486 140 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 HSPB2Q16082 182 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 TIMM50Q3ZCQ8 353 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 SLC18B1Q6NT16 456 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 LINC00470Q9BZP3 86 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 PNRC2Q9NPJ4 139 aaKnown RBP11.23□□□□□ -0.61
TRIM39-204ENST00000396548 MCTS1Q9ULC4 181 aaKnown RBP11.23□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF175Q9Y473 711 aa11.23□□□□□ -0.61
TRIM39-204ENST00000396548 SYNGR4O95473 234 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 SPARCP09486 303 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 NR2C1P13056 603 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 PLA2G5P39877 138 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 GBX2P52951 348 aaPredicted RBP11.22□□□□□ -0.61
TRIM39-204ENST00000396548 HIST1H3AP68431 136 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 EIF2B1Q14232 305 aaKnown RBP11.22□□□□□ -0.61
TRIM39-204ENST00000396548 RNPS1Q15287 305 aaKnown RBP11.22□□□□□ -0.61
TRIM39-204ENST00000396548 RIPPLY2Q5TAB7 128 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 HIST2H3PS2Q5TEC6 136 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 HIST2H3AQ71DI3 136 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 AAED1Q7RTV5 226 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 TUSC5Q8IXB3 177 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF679Q8IYX0 411 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 Q8NA96 180 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 OR52N5Q8NH56 324 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 THEM6Q8WUY1 208 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 HSD17B8Q92506 261 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 TMEM203Q969S6 136 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 MRPL48Q96GC5 212 aaKnown RBP11.22□□□□□ -0.61
TRIM39-204ENST00000396548 ARHGAP21Q5T5U3 1957 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 C1QTNF9BB2RNN3 333 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 DVL2O14641 736 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 DHHO43323 396 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 SLC43A1O75387 559 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 C1QTNF9P0C862 333 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 PSMB10P40306 273 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 ENDOGQ14249 297 aaKnown RBP11.22□□□□□ -0.61
TRIM39-204ENST00000396548 INSL4Q14641 139 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 LIPNQ5VXI9 398 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 USP43Q70EL4 1123 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 RNF133Q8WVZ7 376 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 PNPLA2Q96AD5 504 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 FRRS1LQ9P0K9 344 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 SPTBN2O15020 2390 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 LOC100506127A0A0U1RQW1 187 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 GPR171O14626 319 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 OPRL1P41146 370 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms