RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 FREM3P0C091 2139 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 RAB40ALP0C0E4 278 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TRAPPC2P0DI81 140 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TRAPPC2BP0DI82 140 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 CALCBP10092 127 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 ADRA2CP18825 462 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 DPP4P27487 766 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 HOXD11P31277 338 aaPredicted RBP13.36□□□□□ -0.27
CBX3-202ENST00000396386 P2RY4P51582 365 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 CLRN1P58418 232 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 ZNF239Q16600 458 aaKnown RBP13.36□□□□□ -0.27
CBX3-202ENST00000396386 SLC22A10Q63ZE4 541 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 CATSPERDQ86XM0 798 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 GLB1L2Q8IW92 636 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 DUSP18Q8NEJ0 188 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 OR10H5Q8NGA6 315 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 OR51A4Q8NGJ6 313 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 RBP7Q96R05 134 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TAAR9Q96RI9 348 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 EMC6Q9BV81 110 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 LIN7BQ9HAP6 207 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 KLHL9Q9P2J3 617 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 DKKL1Q9UK85 242 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 ETV7Q9Y603 341 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TRAV8-7A0A075B6U6 113 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TRAF3IP2O43734 574 aaPredicted RBP13.36□□□□□ -0.27
CBX3-202ENST00000396386 LANCL1O43813 399 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 PNPP00491 289 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 IGHG1P01857 330 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 JMJD7P0C870 316 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 FAM157BP0CG42 384 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TCN2P20062 427 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 MMP15P51511 669 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 SLC35A1P78382 337 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TMEM176BQ3YBM2 270 aaPredicted RBP13.36□□□□□ -0.27
CBX3-202ENST00000396386 NHLRC1Q6VVB1 395 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 ESPNLQ6ZVH7 1005 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 DCXRQ7Z4W1 244 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TMPRSS12Q86WS5 348 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 ZNF227Q86WZ6 799 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 LINC00346Q8IVM7 164 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 NAXDQ8IW45 347 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 OR1J4Q8NGS1 313 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 ST7LQ8TDW4 575 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 MIB2Q96AX9 1013 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 NTNG2Q96CW9 530 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 SLC25A38Q96DW6 304 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 OXGR1Q96P68 337 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 MRPL13Q9BYD1 178 aaKnown RBP13.36□□□□□ -0.27
CBX3-202ENST00000396386 SLC22A13Q9Y226 551 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 R4GMQ9 66 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 KIAA1549Q9HCM3 1950 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 AQP7P3A6NL99 342 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 SULT2B1O00204 365 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 CTDSPLO15194 276 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 HPP00738 406 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 PGA4P0DJD7 388 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 PGA3P0DJD8 388 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 ICAM2P13598 275 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 DSCR4P56555 118 aaPredicted RBP13.35□□□□□ -0.27
CBX3-202ENST00000396386 CLDN20P56880 219 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 GPR85P60893 370 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 CHAF1BQ13112 559 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 THEM4Q5T1C6 240 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 ASB18Q6ZVZ8 466 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 TIPARPQ7Z3E1 657 aaKnown RBP13.35□□□□□ -0.27
CBX3-202ENST00000396386 MDGA2Q7Z553 956 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 GPAT4Q86UL3 456 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 CMTM4Q8IZR5 234 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 ZBTB8BQ8NAP8 495 aaPredicted RBP13.35□□□□□ -0.27
CBX3-202ENST00000396386 MCHR2Q969V1 340 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 LIN37Q96GY3 246 aaPredicted RBP13.35□□□□□ -0.27
CBX3-202ENST00000396386 PROK2Q9HC23 129 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 NLKQ9UBE8 527 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 CACNG2Q9Y698 323 aa13.35□□□□□ -0.27
CBX3-202ENST00000396386 PMS2P1A4D2B8 440 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 H3BSH0 61 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 GSTZ1O43708 216 aaPredicted RBP13.34□□□□□ -0.27
CBX3-202ENST00000396386 SRSF10O75494 262 aaKnown RBP13.34□□□□□ -0.27
CBX3-202ENST00000396386 PMS2P2O95744 297 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 MAS1P04201 325 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 CD59P13987 128 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 GPR176Q14439 515 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 RAET1LQ5VY80 246 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 TMEM225Q6GV28 225 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 DEGS2Q6QHC5 323 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 GLCCI1Q86VQ1 547 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 C11orf40Q8WZ69 217 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 YIPF5Q969M3 257 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 SLC25A44Q96H78 314 aaPredicted RBP13.34□□□□□ -0.27
CBX3-202ENST00000396386 TMEM41AQ96HV5 264 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 ZFP3Q96NJ6 502 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 ZNF221Q9UK13 617 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 DHDHQ9UQ10 334 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 MRPS7Q9Y2R9 242 aaKnown RBP13.34□□□□□ -0.27
CBX3-202ENST00000396386 KMT2EQ8IZD2 1858 aa13.34□□□□□ -0.27
CBX3-202ENST00000396386 A0A0B4J293 547 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 A0A1W2PPL8 197 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 HMX3A6NHT5 357 aa13.33□□□□□ -0.27
CBX3-202ENST00000396386 ZNF814B7Z6K7 855 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms