RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 NXPE2Q96DL1 559 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 HYLS1Q96M11 299 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 CHIAQ9BZP6 476 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 AUNIPQ9H7T9 357 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 ELOVL3Q9HB03 270 aa12.53□□□□□ -0.4
SNCA-204ENST00000394989 ETV2O00321 342 aaPredicted RBP12.52□□□□□ -0.41
SNCA-204ENST00000394989 PNPP00491 289 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 CFDP00746 253 aaPredicted RBP12.52□□□□□ -0.41
SNCA-204ENST00000394989 RPS15P62841 145 aaKnown RBP12.52□□□□□ -0.41
SNCA-204ENST00000394989 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 ADAMTS14Q8WXS8 1223 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 GCDHQ92947 438 aaPredicted RBP12.52□□□□□ -0.41
SNCA-204ENST00000394989 PPP1R14AQ96A00 147 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 C4orf45Q96LM5 186 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 NIPAL2Q9H841 368 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 KLRF1Q9NZS2 232 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 OR5V1Q9UGF6 321 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 ING4Q9UNL4 249 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 TRBV5-7A0A0A0MS05 114 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 PDCD5O14737 125 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 NAGAP17050 411 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.41
SNCA-204ENST00000394989 SUMO3P55854 103 aaPredicted RBP12.52□□□□□ -0.41
SNCA-204ENST00000394989 SLC17A1Q14916 467 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 MDGA2Q7Z553 956 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 TMEM106AQ96A25 262 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 CMTM3Q96MX0 182 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 TRAF4Q9BUZ4 470 aaPredicted RBP12.52□□□□□ -0.41
SNCA-204ENST00000394989 B3GNT2Q9NY97 397 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 NUP50Q9UKX7 468 aa12.52□□□□□ -0.41
SNCA-204ENST00000394989 COA3Q9Y2R0 106 aaPredicted RBP12.52□□□□□ -0.41
SNCA-204ENST00000394989 IGKV1D-43A0A0B4J1Z2 117 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 TMEM212A6NML5 194 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 PHYHO14832 338 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 DKK1O94907 266 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 SPARCP09486 303 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 MAP2K6P52564 334 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 ADAM8P78325 824 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 FMODQ06828 376 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 EXOSC2Q13868 293 aaKnown RBP12.51□□□□□ -0.41
SNCA-204ENST00000394989 NTRK2Q16620 822 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 TEX30Q5JUR7 227 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 PEAR1Q5VY43 1037 aaPredicted RBP12.51□□□□□ -0.41
SNCA-204ENST00000394989 SIAH3Q8IW03 269 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 MFSD8Q8NHS3 518 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 ASB10Q8WXI3 467 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 TTC9Q92623 222 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 GTPBP2Q9BX10 602 aaKnown RBP12.51□□□□□ -0.41
SNCA-204ENST00000394989 TCF7L1Q9HCS4 588 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 B3GALT1Q9Y5Z6 326 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 H0YC42 278 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 H3BML4 177 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 LGALS8O00214 317 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 FGF5P12034 268 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 IFNGR1P15260 489 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 CTRB1P17538 263 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 MAPK3P27361 379 aaPredicted RBP12.51□□□□□ -0.41
SNCA-204ENST00000394989 FOXK1P85037 733 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 PITPNAQ00169 270 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 ROM1Q03395 351 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 CTRB2Q6GPI1 263 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 FDX2Q6P4F2 183 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 SERPINA12Q8IW75 414 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 ZNF679Q8IYX0 411 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 OR5L2Q8NGL0 311 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 MCHR2Q969V1 340 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 TRABD2BA6NFA1 517 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 TRIM77I1YAP6 450 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 CTDSPLO15194 276 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 ZFAND5O76080 213 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 CSRP1P21291 193 aaKnown RBP12.51□□□□□ -0.41
SNCA-204ENST00000394989 MFGE8Q08431 387 aaPredicted RBP12.51□□□□□ -0.41
SNCA-204ENST00000394989 ZP4Q12836 540 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 HACD4Q5VWC8 232 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 ASPHD2Q6ICH7 369 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 POC1BQ8TC44 478 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 SMIM4Q8WVI0 70 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 FBXW5Q969U6 566 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 CLEC4MQ9H2X3 399 aaPredicted RBP12.51□□□□□ -0.41
SNCA-204ENST00000394989 MED29Q9NX70 200 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 SLC22A13Q9Y226 551 aa12.51□□□□□ -0.41
SNCA-204ENST00000394989 HSPB2A8KAH6 182 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 D6RAR5 112 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 ZNF208O43345 1280 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 GSTZ1O43708 216 aaPredicted RBP12.5□□□□□ -0.41
SNCA-204ENST00000394989 MAS1P04201 325 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 NAT2P11245 290 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 RASGEF1BQ0VAM2 473 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 PLA2G7Q13093 441 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 HSPB2Q16082 182 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 PLPPR5Q32ZL2 321 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 SLC18B1Q6NT16 456 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 H1FNTQ75WM6 255 aaPredicted RBP12.5□□□□□ -0.41
SNCA-204ENST00000394989 GPR148Q8TDV2 347 aa12.5□□□□□ -0.41
SNCA-204ENST00000394989 RASL10BQ96S79 203 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms