RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PYCR3Q53H96 274 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 GRAMD2AQ8IUY3 354 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 SPPL3Q8TCT6 385 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 SMIM19Q96E16 107 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 CSF3RQ99062 836 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 SRRQ9GZT4 340 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 NWD2Q9ULI1 1742 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 IFITM5A6NNB3 132 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 FOLR1P15328 257 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 BAK1Q16611 211 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 NECAP2Q9NVZ3 263 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 GNG13Q9P2W3 67 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 ZNF629Q9UEG4 869 aaPredicted RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 TMEM235A6NFC5 223 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 ANKRD61A6NGH8 418 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 GPR171O14626 319 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 ST8SIA3O43173 380 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 SCGB1D1O95968 90 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 CD1CP29017 333 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 SDHAP31040 664 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 CDK5R1Q15078 307 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 GABRG1Q8N1C3 465 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 ZNF680Q8NEM1 530 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 KIRREL1Q96J84 757 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 OR6C1Q96RD1 312 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 PATZ1Q9HBE1 687 aaKnown RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 TAF9BQ9HBM6 251 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 FGF20Q9NP95 211 aaPredicted RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 TAS2R4Q9NYW5 299 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 NXT1Q9UKK6 140 aaKnown RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 BSGP35613 385 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 MRPL58Q14197 206 aaKnown RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 KPTNQ9Y664 436 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 NUP214P35658 2090 aaPredicted RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 MAGEB4O15481 346 aaPredicted RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 CD22P20273 847 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 ALOX5APP20292 161 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 TAGLN2P37802 199 aaKnown RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 OR10A3P58181 314 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 AKR1C1Q04828 323 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 PDZK1IP1Q13113 114 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 TESK1Q15569 626 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 HSF5Q4G112 596 aaPredicted RBP12.01□□□□□ -0.49
LCA5-202ENST00000392959 CMTM4Q8IZR5 234 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 ARIH2OSQ8N7S6 290 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 LFNGQ8NES3 379 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 EMC6Q9BV81 110 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 RNF32Q9H0A6 362 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 HRASLSQ9HDD0 168 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 EVPLQ92817 2033 aa12.01□□□□□ -0.49
LCA5-202ENST00000392959 LAMA4Q16363 1823 aa12□□□□□ -0.49
LCA5-202ENST00000392959 RP1P56715 2156 aa12□□□□□ -0.49
LCA5-202ENST00000392959 C2orf72A6NCS6 295 aa12□□□□□ -0.49
LCA5-202ENST00000392959 DFFBO76075 338 aa12□□□□□ -0.49
LCA5-202ENST00000392959 AKR7A3O95154 331 aa12□□□□□ -0.49
LCA5-202ENST00000392959 HPNP05981 417 aa12□□□□□ -0.49
LCA5-202ENST00000392959 CD46P15529 392 aa12□□□□□ -0.49
LCA5-202ENST00000392959 CD1EP15812 388 aa12□□□□□ -0.49
LCA5-202ENST00000392959 ENPP1P22413 925 aa12□□□□□ -0.49
LCA5-202ENST00000392959 SOX18P35713 384 aa12□□□□□ -0.49
LCA5-202ENST00000392959 RAD52P43351 418 aa12□□□□□ -0.49
LCA5-202ENST00000392959 CARD18P57730 90 aa12□□□□□ -0.49
LCA5-202ENST00000392959 ZNF77Q15935 545 aa12□□□□□ -0.49
LCA5-202ENST00000392959 ACOT7LQ6ZUV0 252 aa12□□□□□ -0.49
LCA5-202ENST00000392959 OR13C5Q8NGS8 318 aa12□□□□□ -0.49
LCA5-202ENST00000392959 OR10Z1Q8NGY1 313 aa12□□□□□ -0.49
LCA5-202ENST00000392959 SLC25A43Q8WUT9 341 aaPredicted RBP12□□□□□ -0.49
LCA5-202ENST00000392959 ST8SIA4Q92187 359 aa12□□□□□ -0.49
LCA5-202ENST00000392959 SLC6A17Q9H1V8 727 aa12□□□□□ -0.49
LCA5-202ENST00000392959 FKRPQ9H9S5 495 aa12□□□□□ -0.49
LCA5-202ENST00000392959 PRAMEF25A6NGN4 478 aa12□□□□□ -0.49
LCA5-202ENST00000392959 STMND1H3BQB6 276 aa12□□□□□ -0.49
LCA5-202ENST00000392959 FZD6O60353 706 aa12□□□□□ -0.49
LCA5-202ENST00000392959 EIF4EP06730 217 aaKnown RBP12□□□□□ -0.49
LCA5-202ENST00000392959 P2RX1P51575 399 aa12□□□□□ -0.49
LCA5-202ENST00000392959 BAXQ07812 192 aa12□□□□□ -0.49
LCA5-202ENST00000392959 ACKR1Q16570 336 aa12□□□□□ -0.49
LCA5-202ENST00000392959 NKG7Q16617 165 aa12□□□□□ -0.49
LCA5-202ENST00000392959 PAN3Q58A45 887 aaKnown RBP12□□□□□ -0.49
LCA5-202ENST00000392959 DOK3Q7L591 496 aa12□□□□□ -0.49
LCA5-202ENST00000392959 OR52H1Q8NGJ2 320 aa12□□□□□ -0.49
LCA5-202ENST00000392959 ZFPM2Q8WW38 1151 aa12□□□□□ -0.49
LCA5-202ENST00000392959 MYEOVQ96EZ4 313 aa12□□□□□ -0.49
LCA5-202ENST00000392959 C14orf79Q96F83 325 aa12□□□□□ -0.49
LCA5-202ENST00000392959 RNF170Q96K19 258 aa12□□□□□ -0.49
LCA5-202ENST00000392959 PIGQQ9BRB3 760 aa12□□□□□ -0.49
LCA5-202ENST00000392959 MED18Q9BUE0 208 aa12□□□□□ -0.49
LCA5-202ENST00000392959 ZNF385DQ9H6B1 395 aa12□□□□□ -0.49
LCA5-202ENST00000392959 OBP2AQ9NY56 170 aa12□□□□□ -0.49
LCA5-202ENST00000392959 GPR160Q9UJ42 338 aa12□□□□□ -0.49
LCA5-202ENST00000392959 PIGLQ9Y2B2 252 aa12□□□□□ -0.49
LCA5-202ENST00000392959 HS3ST3A1Q9Y663 406 aa12□□□□□ -0.49
LCA5-202ENST00000392959 NDUFA6P56556 154 aa12□□□□□ -0.49
LCA5-202ENST00000392959 EMC4Q5J8M3 183 aa12□□□□□ -0.49
LCA5-202ENST00000392959 USP51Q70EK9 711 aa12□□□□□ -0.49
LCA5-202ENST00000392959 CPEB2Q7Z5Q1 589 aaKnown RBP12□□□□□ -0.49
LCA5-202ENST00000392959 CCDC71Q8IV32 467 aaPredicted RBP12□□□□□ -0.49
LCA5-202ENST00000392959 TMED6Q8WW62 240 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms