RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ZNF768Q9H5H4 540 aaKnown RBP14.94□□□□□ -0.02
SNX9-201ENST00000392185 ZNF224Q9NZL3 707 aa14.94□□□□□ -0.02
SNX9-201ENST00000392185 HIF3AQ9Y2N7 669 aa14.94□□□□□ -0.02
SNX9-201ENST00000392185 PCDHGA1Q9Y5H4 931 aa14.94□□□□□ -0.02
SNX9-201ENST00000392185 CPEP16870 476 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 CDAP32320 146 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 VAMP2P63027 116 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 FUT7Q11130 342 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 TPBGQ13641 420 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 ZNF141Q15928 474 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 APH1AQ96BI3 265 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 SIGLEC11Q96RL6 698 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 GPA33Q99795 319 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 TMEM246Q9BRR3 403 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 FGF20Q9NP95 211 aaPredicted RBP14.93□□□□□ -0.02
SNX9-201ENST00000392185 PCDHGA3Q9Y5H0 932 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 MDC1Q14676 2089 aaKnown RBP14.93□□□□□ -0.02
SNX9-201ENST00000392185 SPAARA0A1B0GVQ0 90 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 LOC107986453A0A1B0GWG9 222 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 A0A1W2PR77 199 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 OR14I1A6ND48 311 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 INSL4Q14641 139 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 TMEM81Q6P7N7 255 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 ZNF501Q96CX3 271 aaPredicted RBP14.93□□□□□ -0.02
SNX9-201ENST00000392185 MRI1Q9BV20 369 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 KLF13Q9Y2Y9 288 aaPredicted RBP14.93□□□□□ -0.02
SNX9-201ENST00000392185 A0A0G2JMP0 313 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 IGHV3-64DA0A0J9YX35 117 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 ANKUB1A6NFN9 424 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 ZSCAN5BA6NJL1 495 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 SEC61A1P61619 476 aaKnown RBP14.93□□□□□ -0.02
SNX9-201ENST00000392185 EMC4Q5J8M3 183 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 APOOLQ6UXV4 268 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 VASH2Q86V25 355 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 OR4M2Q8NGB6 313 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 OR51E1Q8TCB6 317 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 YIPF6Q96EC8 236 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 ARL5BQ96KC2 179 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 ERVMER34-1Q9H9K5 563 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 OR2S2Q9NQN1 319 aa14.93□□□□□ -0.02
SNX9-201ENST00000392185 KANTRA0A1W2PQU2 76 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 SGCEO43556 437 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 LIMS3P0CW19 117 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 LIMS4P0CW20 117 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 LAP3P28838 519 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 CEBPGP53567 150 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 FAPQ12884 760 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 CDK5R1Q15078 307 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNX9-201ENST00000392185 ZADH2Q8N4Q0 377 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 SORCS2Q96PQ0 1159 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 RASL10BQ96S79 203 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 ZPBPQ9BS86 351 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 RAB40ALP0C0E4 278 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 CSF2RBP32927 897 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 GDNFP39905 211 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 FAM71CQ8NEG0 241 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 RAB40AQ8WXH6 277 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 SLC25A46Q96AG3 418 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 SLCO1C1Q9NYB5 712 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 PFDN2Q9UHV9 154 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 ZFHX2Q9C0A1 2572 aaPredicted RBP14.92□□□□□ -0.02
SNX9-201ENST00000392185 TOX3O15405 576 aaPredicted RBP14.92□□□□□ -0.02
SNX9-201ENST00000392185 ZNF93P35789 620 aaPredicted RBP14.92□□□□□ -0.02
SNX9-201ENST00000392185 CTF1Q16619 201 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 TATDN3Q17R31 274 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 MKXQ8IYA7 352 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 ZNF679Q8IYX0 411 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 OR6V1Q8N148 313 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 OR2Y1Q8NGV0 311 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 APH1BQ8WW43 257 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 ABHD6Q9BV23 337 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 NIPAL2Q9H841 368 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 TCRBV16S1A1N1A0A5B0 115 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 KLK10O43240 276 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 EDN3P14138 238 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 MSR1P21757 451 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 STK35Q8TDR2 534 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 FAM3DQ96BQ1 224 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 OXGR1Q96P68 337 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 NKX3-1Q99801 234 aaPredicted RBP14.92□□□□□ -0.02
SNX9-201ENST00000392185 TMEM43Q9BTV4 400 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 TMEM59Q9BXS4 323 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 OBP2BQ9NPH6 170 aa14.92□□□□□ -0.02
SNX9-201ENST00000392185 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.91□□□□□ -0.02
SNX9-201ENST00000392185 FITM1A5D6W6 292 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 HSPB6O14558 160 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 DVL2O14641 736 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 OIP5O43482 229 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 CDKN2AP42771 156 aaKnown RBP14.91□□□□□ -0.02
SNX9-201ENST00000392185 ARHGDIBP52566 201 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 FOXC1Q12948 553 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 KANSL1Q7Z3B3 1105 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 DNASE2BQ8WZ79 361 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 IP6K3Q96PC2 410 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 UCK1Q9HA47 277 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 MRPS28Q9Y2Q9 187 aaKnown RBP14.91□□□□□ -0.02
SNX9-201ENST00000392185 DIRAS3O95661 229 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 OR10K2Q6IF99 312 aa14.91□□□□□ -0.02
SNX9-201ENST00000392185 PRSS42Q7Z5A4 293 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms