RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 BPIFCQ8NFQ6 507 aa3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 OR2A1Q8NGT9 310 aa3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 OR4S2Q8NH73 311 aa3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 LYPD6BQ8NI32 183 aa3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 AGR3Q8TD06 166 aa3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 C8orf44Q96CB5 159 aa3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 XPO6Q96QU8 1125 aaKnown RBP3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 F11RQ9Y624 299 aaKnown RBP3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 MAPK8IP3Q9UPT6 1336 aa3.61□□□□□ -1.83
RNU6-40P-201ENST00000384254 ZNFX1Q9P2E3 1918 aaKnown RBP3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 SS18L1O75177 396 aaPredicted RBP3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 FKBP6O75344 327 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 SRP72O76094 671 aaKnown RBP3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 ASGR1P07306 291 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 RETP07949 1114 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 OR8G3PP0DMU2 310 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 CSNK1EP49674 416 aaKnown RBP3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 SLC25A11Q02978 314 aaKnown RBP3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 GGTLC2Q14390 218 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 GINS1Q14691 196 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 PTPN20Q4JDL3 420 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 TEX43Q6ZNM6 134 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 MICU2Q8IYU8 434 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 NRGNQ92686 78 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 CREB3L1Q96BA8 519 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 PRRC1Q96M27 445 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 SLC25A39Q9BZJ4 359 aaPredicted RBP3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 PARP12Q9H0J9 701 aaKnown RBP3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 FAM49BQ9NUQ9 324 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 MRPS18BQ9Y676 258 aaKnown RBP3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 LTBP1Q14766 1721 aa3.6□□□□□ -1.83
RNU6-40P-201ENST00000384254 H0YIV9 168 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 WARSP23381 471 aaKnown RBP3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 OMGP23515 440 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 MAS1LP35410 378 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 CCR6P51684 374 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 MNAT1P51948 309 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 HERVK_113P61574 105 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 TRAM2Q15035 370 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 WDR43Q15061 677 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 PON3Q15166 354 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 PGGHGQ32M88 737 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 HES5Q5TA89 166 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 ZNF530Q6P9A1 599 aaPredicted RBP3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 MBOAT1Q6ZNC8 495 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 OTUD6AQ7L8S5 288 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 JAGN1Q8N5M9 183 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 MICU1Q9BPX6 476 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 IFI27L2Q9H2X8 130 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 MTCH1Q9NZJ7 389 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 OR12D3Q9UGF7 316 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 TRMT112Q9UI30 125 aaKnown RBP3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 ZNF223Q9UK11 482 aaPredicted RBP3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 WSB1Q9Y6I7 421 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 WDR19Q8NEZ3 1342 aa3.59□□□□□ -1.83
RNU6-40P-201ENST00000384254 KBTBD11-OT1A0A1B0GTJ5 212 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 SUPT3HB4E1H0 165 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 TMX2-CTNND1H3BSU7 103 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 NUPL2O15504 423 aaKnown RBP3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 EIF4E2O60573 245 aaKnown RBP3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 ICOSLGO75144 302 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 CCNB2O95067 398 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 CCNB1P14635 433 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 RAB3BP20337 219 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 GSTM3P21266 225 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 MAGEA1P43355 309 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 KRTAP10-3P60369 221 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 MXD1Q05195 221 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 OR7A5Q15622 319 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 HSDL1Q3SXM5 330 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 TMEM220Q6QAJ8 160 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 CLEC2AQ6UVW9 174 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 LYPD2Q6UXB3 125 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 TMCO2Q7Z6W1 182 aaPredicted RBP3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 PRSS58Q8IYP2 241 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 KATNAL2Q8IYT4 538 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 SLC34A3Q8N130 599 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 ZNF433Q8N7K0 673 aaPredicted RBP3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 BMFQ96LC9 184 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 TEKT3Q9BXF9 490 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 SLC25A2Q9BXI2 301 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 ACTR3CQ9C0K3 210 aaPredicted RBP3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 ISYNA1Q9NPH2 558 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 UVRAGQ9P2Y5 699 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 CLN8Q9UBY8 286 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 SLC17A4Q9Y2C5 497 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 SAR1BQ9Y6B6 198 aa3.58□□□□□ -1.84
RNU6-40P-201ENST00000384254 NCF1BA6NI72 391 aaPredicted RBP3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 NCF1CA8MVU1 366 aaPredicted RBP3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 GOLGA8TH3BQL2 631 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 CASC3O15234 703 aaKnown RBP3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 CD5LO43866 347 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 MEGF6O75095 1541 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 IGLV2-23P01705 113 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 STAG3L3P0CL85 134 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 RALBP11234 206 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 CEACAM6P40199 344 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 CDKN2BP42772 138 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms