RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 SLC6A5Q9Y345 797 aa14.67□□□□□ -0.06
NKX3-1-201ENST00000380871 TLCD2A6NGC4 264 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 ATP6V1G2-DDX39BF2Z307 99 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 LDOC1O95751 146 aaPredicted RBP14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 PNPP00491 289 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 LIPCP11150 499 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 SQSTM1Q13501 440 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 C2orf76Q3KRA6 126 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 ARSKQ6UWY0 536 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 C17orf107Q6ZR85 190 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 LHFPL5Q8TAF8 219 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 GPR148Q8TDV2 347 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 SCARB1Q8WTV0 552 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 PTPMT1Q8WUK0 201 aaPredicted RBP14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 COMMD4Q9H0A8 199 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 SHARPINQ9H0F6 387 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 POFUT1Q9H488 388 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 ATXN7L1Q9ULK2 861 aaPredicted RBP14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 THADAQ6YHU6 1953 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 VPS13AQ96RL7 3174 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 A0A1W2PR77 199 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 CPED1A4D0V7 1026 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 UTS2O95399 124 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 HLA-DQA2P01906 255 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 SKP2Q13309 424 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 TOMM34Q15785 309 aaPredicted RBP14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 ISXQ2M1V0 245 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 ARHGAP40Q5TG30 622 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 MARCH3Q86UD3 253 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 ZNF615Q8N8J6 731 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 FAM174AQ8TBP5 190 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 ZDHHC12Q96GR4 267 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 FBXO4Q9UKT5 387 aa14.66□□□□□ -0.06
NKX3-1-201ENST00000380871 CLPSP04118 112 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 PPP3CBP16298 524 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 MNDAP41218 407 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 ARHGDIBP52566 201 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 GK2Q14410 553 aaPredicted RBP14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 MEP1BQ16820 701 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 C14orf28Q4W4Y0 310 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 WBP2NLQ6ICG8 309 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 OR6N1Q8NGY5 312 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 C4orf45Q96LM5 186 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 ATG5Q9H1Y0 275 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 NUP210LQ5VU65 1888 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 A8MXK9 166 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 TACR3P29371 465 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 HSD17B7P56937 341 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 ETFDHQ16134 617 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 OR1L3Q8NH93 324 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 ZNF417Q8TAU3 575 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 MCHR2Q969V1 340 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 FAM3DQ96BQ1 224 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 NUDT9Q9BW91 350 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 ELOVL3Q9HB03 270 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 PCNX3Q9H6A9 2034 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 A0A1B0GTQ1 180 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 TUBAL3A6NHL2 446 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 CDC40O60508 579 aaKnown RBP eCLIP14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 ICOSLGO75144 302 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 IGLV3-19P01714 112 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 NAGAP17050 411 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 ACHEP22303 614 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 FAUP35544 74 aaKnown RBP14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 OR10K2Q6IF99 312 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 LANCL3Q6ZV70 420 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 GALNT16Q8N428 558 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 INTS14Q96SY0 518 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 APMAPQ9HDC9 416 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 PRODH2Q9UF12 536 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 CGGBP1Q9UFW8 167 aaPredicted RBP14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 PFDN2Q9UHV9 154 aa14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 CDV3Q9UKY7 258 aaKnown RBP14.65□□□□□ -0.06
NKX3-1-201ENST00000380871 CSN2P05814 226 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 CSF1P09603 554 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 MFGE8Q08431 387 aaPredicted RBP14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 FUT7Q11130 342 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 SDR16C5Q8N3Y7 309 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF454Q8N9F8 522 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 NUDT22Q9BRQ3 303 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 MRI1Q9BV20 369 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 PTDSS2Q9BVG9 487 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 TINAGL1Q9GZM7 467 aaPredicted RBP14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 MFFQ9GZY8 342 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 COL4A2P08572 1712 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 FREM3P0C091 2139 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 TMEM212A6NML5 194 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 HMSDA8MTL9 139 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 GLULP15104 373 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 IL12BP29460 328 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 FNDC7Q5VTL7 733 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 STEAP1BQ6NZ63 245 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 CLEC1AQ8NC01 280 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 BVESQ8NE79 360 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 FBXW5Q969U6 566 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 SLC19A3Q9BZV2 496 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 EVA1AQ9H8M9 152 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 UBQLN4Q9NRR5 601 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 SESN1Q9Y6P5 492 aa14.64□□□□□ -0.07
NKX3-1-201ENST00000380871 MED12Q93074 2177 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms