RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 TEPSINQ96N21 525 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 GSN-AS1Q9NRJ2 163 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 PSORS1C1Q9UIG5 152 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 TRAV27A0A087WT01 109 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 CXorf65A6NEN9 183 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 GPR171O14626 319 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF623O75123 536 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 SCRG1O75711 98 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 NOVA1P51513 510 aaKnown RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 OR2G6Q5TZ20 316 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 RTL6Q6ICC9 239 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 CHAC2Q8WUX2 184 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM37Q8WXS4 190 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 OR5P2Q8WZ92 322 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 FGF13Q92913 245 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 TSLPQ969D9 159 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 LRFN3Q9BTN0 628 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 PARP12Q9H0J9 701 aaKnown RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 HSBP1O75506 76 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 GRPP07492 148 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 RPL7P18124 248 aaKnown RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 CSNK1A1P48729 337 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 NKX3-2P78367 333 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 DLK1P80370 383 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 C6orf136Q5SQH8 315 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 FAM57BQ71RH2 274 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 TEX26Q8N6G2 289 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 SLC25A21Q9BQT8 299 aaPredicted RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 SLC22A7Q9Y694 548 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 MYO9BQ13459 2157 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 A0A1W2PNV4 684 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 H7C1C5 153 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SERPINE2P07093 398 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 COMPP49747 757 aaPredicted RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 TAS2R38P59533 333 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 PPP1CBP62140 327 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 PIP5KL1Q5T9C9 394 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF429Q86V71 674 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 CBLN2Q8IUK8 224 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 OR9A4Q8NGU2 314 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF689Q96CS4 500 aaPredicted RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 HCAR1Q9BXC0 346 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 MMP24Q9Y5R2 645 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SNRPGP15A8MWD9 76 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SNHG28P0DPA3 235 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 CATSPERDQ86XM0 798 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 OR13G1Q8NGZ3 307 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 OR2T27Q8NH04 317 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM59Q9BXS4 323 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 DEFB127Q9H1M4 99 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 INPP5EQ9NRR6 644 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 MED1Q15648 1581 aaPredicted RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 GSK3AP49840 483 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 TAS2R46P59540 309 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SLC25A11Q02978 314 aaKnown RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SEMA3BQ13214 749 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 OR52B6Q8NGF0 335 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 OR13C5Q8NGS8 318 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SLC25A46Q96AG3 418 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SMIM14Q96QK8 99 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 PITPNC1Q9UKF7 332 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 OARD1Q9Y530 152 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 CSNK1G3Q9Y6M4 447 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 KCPQ6ZWJ8 1503 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 CICQ96RK0 1608 aaPredicted RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 A0A1B0GUH1 482 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 PJVKQ0ZLH3 352 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 B3GNTL1Q67FW5 361 aaPredicted RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 BCL2L2Q92843 193 aaPredicted RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 MRGPRX2Q96LB1 330 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 INPP5KQ9BT40 448 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF576Q9H609 170 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 DOK5Q9P104 306 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 PCDHA9Q9Y5H5 950 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 VIRMAQ69YN4 1812 aaKnown RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 NID2Q14112 1375 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 GABRR3A8MPY1 467 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SLC17A3O00476 420 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 DVL1O14640 695 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 RHBDL1O75783 438 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 ACKR3P25106 362 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 F2RP25116 425 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 ARL16Q0P5N6 197 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 PLAC9Q5JTB6 97 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SFXN4Q6P4A7 337 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM184AQ6ZMB5 413 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SLC35F2Q8IXU6 374 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 OR2T4Q8NH00 348 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 SLC2A11Q9BYW1 496 aa9.94□□□□□ -0.82
CLCN4-202ENST00000380833 DHCR7Q9UBM7 475 aaKnown RBP9.94□□□□□ -0.82
CLCN4-202ENST00000380833 IGHV3-20A0A0C4DH32 117 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 CRYM-AS1A6NIL9 109 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 GLB1P16278 677 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 OMGP23515 440 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 RPS25P62851 125 aaKnown RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF91Q05481 1191 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 GCNT2Q8N0V5 402 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 OR5D18Q8NGL1 313 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 NETO1Q8TDF5 533 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms