RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 PSMB3P49720 205 aa13.75□□□□□ -0.21
EXT1-201ENST00000378204 ZBTB37Q5TC79 503 aa13.75□□□□□ -0.21
EXT1-201ENST00000378204 BTNL8Q6UX41 500 aa13.75□□□□□ -0.21
EXT1-201ENST00000378204 SPRED1Q7Z699 444 aa13.75□□□□□ -0.21
EXT1-201ENST00000378204 OR2D3Q8NGH3 330 aa13.75□□□□□ -0.21
EXT1-201ENST00000378204 ZBTB42B2RXF5 422 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 H7BYZ3 331 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 SOCS6O14544 535 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 TUSC2O75896 110 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 SLCO2B1O94956 709 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 OR2F2O95006 317 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 ABHD16AO95870 558 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 ELAVL4P26378 380 aaKnown RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 TEKQ02763 1124 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 OR2F1Q13607 317 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 C9orf135Q5VTT2 229 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 UBTD2Q8WUN7 234 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 TACR1P25103 407 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 RPL29P47914 159 aaKnown RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 CDK5Q00535 292 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 B3GLCTQ6Y288 498 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 SMIM14Q96QK8 99 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 DNMT3BQ9UBC3 853 aaKnown RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 A8MVM7 634 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 GLAP06280 429 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 CD1EP15812 388 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 PRAMEF20Q5VT98 475 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 RNLSQ5VYX0 342 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 CLEC14AQ86T13 490 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 OR52I1Q8NGK6 324 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 MDC1Q14676 2089 aaKnown RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 NRXN3Q9Y4C0 1643 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 SIGLEC6O43699 453 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 TCRBP04435 133 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 SLC2A1P11166 492 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 OMGP23515 440 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 ZNF93P35789 620 aaPredicted RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 MED25Q71SY5 747 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 TCTEX1D1Q8N7M0 179 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 SLC25A21Q9BQT8 299 aaPredicted RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 GOLT1BQ9Y3E0 138 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 GFRA2O00451 464 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 PKIAP61925 76 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 SHEQ5VZ18 495 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 ESPNLQ6ZVH7 1005 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 PTRH1Q86Y79 214 aaKnown RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 OR13C9Q8NGT0 318 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 MRPS28Q9Y2Q9 187 aaKnown RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 PAQR9Q6ZVX9 377 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 BLNKQ8WV28 456 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 CABLES2Q9BTV7 478 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 C11orf54Q9H0W9 315 aaPredicted RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 FBXO8Q9NRD0 319 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 B3GAT1Q9P2W7 334 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 MIOXQ9UGB7 285 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 SLCO1B1Q9Y6L6 691 aa13.74□□□□□ -0.21
EXT1-201ENST00000378204 POLR2AP24928 1970 aaKnown RBP13.74□□□□□ -0.21
EXT1-201ENST00000378204 RPS25P62851 125 aaKnown RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 CLINT1Q14677 625 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 FAM209BQ5JX69 171 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 RPL3LQ92901 407 aaKnown RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 SLC39A9Q9NUM3 307 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 MMACHCQ9Y4U1 282 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 CLDN12P56749 244 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 CARD18P57730 90 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 RELL2Q8NC24 303 aaPredicted RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 FER1L6-AS2Q96M78 137 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 PIKFYVEQ9Y2I7 2098 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 PDGFBP01127 241 aaPredicted RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 CTRB1P17538 263 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 ITGB8P26012 769 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 ENDOGQ14249 297 aaKnown RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 CTRB2Q6GPI1 263 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 STEAP1BQ6NZ63 245 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 Q6ZPB1 254 aaPredicted RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 TMEFF1Q8IYR6 380 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 CXorf36Q9H7Y0 433 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 TLCD2A6NGC4 264 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 LTC4SQ16873 150 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 PBX4Q9BYU1 374 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 SLC35D1Q9NTN3 355 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 SRMP19623 302 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 ALKBH1Q13686 389 aaKnown RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 CDH26Q8IXH8 852 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 NMNAT3Q96T66 252 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 SPACA1Q9HBV2 294 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 SLC16A6O15403 523 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 GSTP1P09211 210 aaKnown RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 SLC35E2P0CK97 266 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 FABP4P15090 132 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 ZNF133P52736 654 aaPredicted RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 RPL24P83731 157 aaKnown RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 CRMP1Q14194 572 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 FYTTD1Q96QD9 318 aaKnown RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 ABHD6Q9BV23 337 aa13.73□□□□□ -0.21
EXT1-201ENST00000378204 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.73□□□□□ -0.21
EXT1-201ENST00000378204 ZNF331Q9NQX6 463 aaPredicted RBP13.73□□□□□ -0.21
EXT1-201ENST00000378204 AKAP6Q13023 2319 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms