RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CDKN1CP49918 316 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SLC36A2Q495M3 483 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TFAP2EQ6VUC0 442 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 BPIFB2Q8N4F0 458 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 NOL4LQ96MY1 436 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SMG9Q9H0W8 520 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CA5BQ9Y2D0 317 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 GABRA1P14867 456 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PARGQ86W56 976 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SEMA6DQ8NFY4 1073 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 OR6X1Q8NH79 312 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TMLHEQ9NVH6 421 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 RCE1Q9Y256 329 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PRKAB1Q9Y478 270 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ADM5C9JUS6 153 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PDE6DO43924 150 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PBLDP30039 288 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 MDH2P40926 338 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 RBP2P50120 134 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 RAB11AP62491 216 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 MFAP5Q13361 173 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OR5M1Q8NGP8 315 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 METTL7AQ9H8H3 244 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PRKACAP17612 351 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF93P35789 620 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PJVKQ0ZLH3 352 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 LYPD4Q6UWN0 246 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 EQTNQ9NQ60 294 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 UBE2J1Q9Y385 318 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PCDHGA9Q9Y5G4 932 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 RREB1Q92766 1687 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PRSS38A1L453 326 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PPP6CO00743 305 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 CHATP28329 748 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 EMP2P54851 167 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF585AQ6P3V2 769 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 LHFPL2Q6ZUX7 228 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 SNX29P2Q8IUI4 249 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 GIMAP1Q8WWP7 306 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PLEKHB1Q9UF11 243 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 CFDP00746 253 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 P2RY2P41231 377 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 SLC17A1Q14916 467 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF425Q6IV72 752 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 HSD11B1LQ7Z5J1 315 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 NAA40Q86UY6 237 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ABHD6Q9BV23 337 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 HRH3Q9Y5N1 445 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 MICAL3Q7RTP6 2002 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 BAZ2BQ9UIF8 2168 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 A0A087WWC5 75 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 RPS15P62841 145 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PIP5KL1Q5T9C9 394 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 TMPPEQ6ZT21 453 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 CXorf36Q9H7Y0 433 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OR52A1Q9UKL2 312 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 FBLL1A6NHQ2 334 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 HSBP1L1C9JCN9 74 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF878C9JN71 531 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 C2orf76Q3KRA6 126 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OR10K2Q6IF99 312 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 BOCQ9BWV1 1114 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 GAR1Q9NY12 217 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OR4E1P0C645 316 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 TNFSF4P23510 183 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 NEIL1Q96FI4 390 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 LSM2Q9Y333 95 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 SRSF4Q08170 494 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 C6orf183Q5T699 404 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 C17orf107Q6ZR85 190 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 APCDD1Q8J025 514 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ENKD1Q9H0I2 346 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 A0A1W2PR48 441 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ARPC5O15511 151 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 FSTP19883 344 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 BCAS3Q9H6U6 928 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OR4D10Q8NGI6 311 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 EDARADDQ8WWZ3 215 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 WDR54Q9H977 334 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF304Q9HCX3 659 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF239Q16600 458 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 GPBAR1Q8TDU6 330 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM225BP0DP42 221 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 NFAM1Q8NET5 270 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OR8B4Q96RC9 309 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 VENTXO95231 258 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 LEG1Q6P5S2 330 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 A0A1W2PQU0 124 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 CPSF4LA6NMK7 179 aaKnown RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 NPIPA2E9PIF3 369 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 NPIPA3F8WFD2 350 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 BCL2L11O43521 198 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 STK17BO94768 372 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 HYAL2Q12891 473 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM18Q96B42 140 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 SPANXCQ9NY87 97 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 MC2RQ01718 297 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ADTRPQ96IZ2 230 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 HRASLSQ9HDD0 168 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM72A0PK05 275 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms