RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 NRIP3Q9NQ35 241 aa13.25□□□□□ -0.29
UBA1-202ENST00000377269 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
UBA1-202ENST00000377269 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
UBA1-202ENST00000377269 LANCL2Q9NS86 450 aa13.25□□□□□ -0.29
UBA1-202ENST00000377269 ANKRD10Q9NXR5 420 aa13.25□□□□□ -0.29
UBA1-202ENST00000377269 PCDHB10Q9UN67 800 aa13.25□□□□□ -0.29
UBA1-202ENST00000377269 FOXJ3Q9UPW0 622 aa13.25□□□□□ -0.29
UBA1-202ENST00000377269 SLC22A31A6NKX4 558 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 NDUFS6O75380 124 aaKnown RBP13.24□□□□□ -0.29
UBA1-202ENST00000377269 IGHV2-70P01814 119 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 ZGLP1P0C6A0 271 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 FOLR2P14207 255 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 FBLP22087 321 aaKnown RBP13.24□□□□□ -0.29
UBA1-202ENST00000377269 PYCR1P32322 319 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 CBFBQ13951 182 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 MLC1Q15049 377 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 TRMT12Q53H54 448 aaKnown RBP13.24□□□□□ -0.29
UBA1-202ENST00000377269 FAM69BQ5VUD6 431 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 FAM111BQ6SJ93 734 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 MBOAT2Q6ZWT7 520 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 COX15Q7KZN9 410 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 ZNF546Q86UE3 836 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 OR7G2Q8NG99 324 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 TEAD3Q99594 435 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 CMKLR1Q99788 373 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 MESP1Q9BRJ9 268 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 ZNF629Q9UEG4 869 aaPredicted RBP13.24□□□□□ -0.29
UBA1-202ENST00000377269 MKL2Q9ULH7 1088 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 SPTBN2O15020 2390 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 CDC42EP2O14613 210 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 TMEM127O75204 238 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 AKR7A3O95154 331 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 SBK2P0C263 348 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 CT62P0C5K7 136 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 FGF5P12034 268 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 TRHRP34981 398 aaPredicted RBP13.24□□□□□ -0.29
UBA1-202ENST00000377269 RPS11P62280 158 aaKnown RBP eCLIP13.24□□□□□ -0.29
UBA1-202ENST00000377269 PRR5P85299 388 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 ZNF345Q14585 488 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 C3orf33Q6P1S2 294 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 OR1S2Q8NGQ3 325 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 PRTFDC1Q9NRG1 225 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 ZCCHC3Q9NUD5 404 aaKnown RBP13.24□□□□□ -0.29
UBA1-202ENST00000377269 SRPK3Q9UPE1 567 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 LOXL2Q9Y4K0 774 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 COL27A1Q8IZC6 1860 aaPredicted RBP13.24□□□□□ -0.29
UBA1-202ENST00000377269 AHCTF1Q8WYP5 2266 aa13.24□□□□□ -0.29
UBA1-202ENST00000377269 C5orf52A6NGY3 159 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 IFITM5A6NNB3 132 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 BDKRB2P30411 391 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 KHKP50053 298 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 SSTP61278 116 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
UBA1-202ENST00000377269 IL11RAQ14626 422 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 HES3Q5TGS1 186 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 CDCP2Q5VXM1 449 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 RBMS3Q6XE24 437 aaKnown RBP13.23□□□□□ -0.29
UBA1-202ENST00000377269 ZFP82Q8N141 532 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 STK35Q8TDR2 534 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 EDARADDQ8WWZ3 215 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 TSLPQ969D9 159 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 S100A16Q96FQ6 103 aaKnown RBP13.23□□□□□ -0.29
UBA1-202ENST00000377269 C16orf58Q96GQ5 468 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 RNF122Q9H9V4 155 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 GPR55Q9Y2T6 319 aaPredicted RBP13.23□□□□□ -0.29
UBA1-202ENST00000377269 B3GALT1Q9Y5Z6 326 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 PROB1E7EW31 1015 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 HRKO00198 91 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 UBE2CO00762 179 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 FRS3O43559 492 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 CTNSO60931 367 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 SLC25A12O75746 678 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 MT-CO3P00414 261 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 LUMP51884 338 aaPredicted RBP13.23□□□□□ -0.29
UBA1-202ENST00000377269 UBE2MP61081 183 aaKnown RBP13.23□□□□□ -0.29
UBA1-202ENST00000377269 NKAIN1Q4KMZ8 207 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 PRAMEF8Q5VWM4 474 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 PRAMEF7Q5VXH5 474 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 UNQ9370/PRO34162Q6UXP9 181 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 FCRLAQ7L513 359 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 ZNF595Q8IYB9 648 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 C15orf40Q8WUR7 153 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 TNFAIP8L1Q8WVP5 186 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 RAB40AQ8WXH6 277 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 SMIM19Q96E16 107 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 PTCHD1Q96NR3 888 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 GFI1Q99684 422 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 ADGRL4Q9HBW9 690 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 MIOXQ9UGB7 285 aa13.23□□□□□ -0.29
UBA1-202ENST00000377269 CLDN4O14493 209 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 BHLHE40O14503 412 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 BCL2L11O43521 198 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 PIP5K1CO60331 668 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 OR2F2O95006 317 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 HTR3BO95264 441 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 THY1P04216 161 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 PDZK1IP1Q13113 114 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 OR2F1Q13607 317 aa13.22□□□□□ -0.29
UBA1-202ENST00000377269 HABP2Q14520 560 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms