RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 STOMP27105 288 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 GSK3BP49841 420 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 TAF11Q15544 211 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 CBLL1Q75N03 491 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 CPEB3Q8NE35 698 aaKnown RBP17.97■□□□□ 0.47
VSX1-201ENST00000376707 GEMIN6Q8WXD5 167 aaKnown RBP17.97■□□□□ 0.47
VSX1-201ENST00000376707 NABP1Q96AH0 204 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 TMEM186Q96B77 213 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 MYLK2Q9H1R3 596 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 HIF1ANQ9NWT6 349 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 NKIRAS2Q9NYR9 191 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 EIF3KQ9UBQ5 218 aaKnown RBP17.97■□□□□ 0.47
VSX1-201ENST00000376707 GRIP1Q9Y3R0 1128 aa17.97■□□□□ 0.47
VSX1-201ENST00000376707 IGKV1D-43A0A0B4J1Z2 117 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 FFAR1O14842 300 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 GAAP10253 952 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 TEKQ02763 1124 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 GLO1Q04760 184 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 UNQ6126/PRO20091Q6UXV3 157 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 OR51F2Q8NH61 342 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 RBP7Q96R05 134 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 ALG12Q9BV10 488 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 DECR2Q9NUI1 292 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 ABCD2Q9UBJ2 740 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 METRNQ9UJH8 293 aa17.96■□□□□ 0.47
VSX1-201ENST00000376707 C5orf49A4QMS7 147 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 GSTA4O15217 222 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 PRSS23O95084 383 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 ZNF682O95780 498 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 IGHV3-13P01766 116 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 IGHMP01871 453 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 GCH1P30793 250 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 CRYBB2P43320 205 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 GDI2P50395 445 aaKnown RBP17.95■□□□□ 0.46
VSX1-201ENST00000376707 NUDT2P50583 147 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 RPL27P61353 136 aaKnown RBP17.95■□□□□ 0.46
VSX1-201ENST00000376707 ERVK-25P63136 954 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 PRKCDQ05655 676 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 TRAM2Q15035 370 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 ANKDD1AQ495B1 522 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 IFI44LQ53G44 452 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 THEM4Q5T1C6 240 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 SLC25A47Q6Q0C1 308 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 RNF113BQ8IZP6 322 aaKnown RBP17.95■□□□□ 0.46
VSX1-201ENST00000376707 AKR7LQ8NHP1 331 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 FNDC8Q8TC99 324 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 POM121L2Q96KW2 1035 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 FNDC11Q9BVV2 318 aa17.95■□□□□ 0.46
VSX1-201ENST00000376707 IGHV1-69-2A0A0G2JMI3 117 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 J3KTA2 159 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 MAKP20794 623 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 GUCA1AP43080 201 aaPredicted RBP17.94■□□□□ 0.46
VSX1-201ENST00000376707 YAP1P46937 504 aaKnown RBP17.94■□□□□ 0.46
VSX1-201ENST00000376707 CTXN1P60606 82 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 LMO4P61968 165 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 MVKQ03426 396 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 FHL1Q13642 323 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 TSTQ16762 297 aaKnown RBP17.94■□□□□ 0.46
VSX1-201ENST00000376707 ZNF718Q3SXZ3 478 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 SPATA46Q5T0L3 261 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 AVPI1Q5T686 147 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 FAM27BQ5VT28 67 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 FAM205BPQ63HN1 556 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 SHQ1Q6PI26 577 aaKnown RBP17.94■□□□□ 0.46
VSX1-201ENST00000376707 IGFN1Q86VF2 1251 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 NRMQ8IXM6 262 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 ZNF101Q8IZC7 436 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 LRRC75AQ8NAA5 344 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 GTF3AQ92664 365 aaKnown RBP17.94■□□□□ 0.46
VSX1-201ENST00000376707 CMTM5Q96DZ9 223 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 HSH2DQ96JZ2 352 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 LRRC37BQ96QE4 947 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 ELAC2Q9BQ52 826 aaKnown RBP17.94■□□□□ 0.46
VSX1-201ENST00000376707 OCEL1Q9H607 264 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 METTL17Q9H7H0 456 aaPredicted RBP17.94■□□□□ 0.46
VSX1-201ENST00000376707 RHCGQ9UBD6 479 aa17.94■□□□□ 0.46
VSX1-201ENST00000376707 LOC100509620A0A075B734 347 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 HAX1O00165 279 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 SERPINA1P01009 418 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 ANPEPP15144 967 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 ITGA2P17301 1181 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 LAP3P28838 519 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 WNT5AP41221 380 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 ZNF81P51508 661 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 PSG4Q00888 419 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 USP51Q70EK9 711 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 ALDH16A1Q8IZ83 802 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 CLDN22Q8N7P3 220 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 FAM156AQ8NDB6 213 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 OR51A7Q8NH64 312 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 ACOT11Q8WXI4 607 aaPredicted RBP17.93■□□□□ 0.46
VSX1-201ENST00000376707 KCTD14Q9BQ13 255 aaPredicted RBP17.93■□□□□ 0.46
VSX1-201ENST00000376707 SAP30LQ9HAJ7 183 aa17.93■□□□□ 0.46
VSX1-201ENST00000376707 TRAV27A0A087WT01 109 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 A0A087WUU8 490 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 TRAV20A0A0B4J274 112 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 A0A1W2PPL8 197 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 PLSCR5A0PG75 271 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 A6NIZ1 184 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 EFCAB9A8MZ26 197 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms