RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 FFAR4Q5NUL3 377 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 RPUSD4Q96CM3 377 aaKnown RBP10.75□□□□□ -0.69
VPS13A-205ENST00000376636 OR5G3P0C626 314 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 AKR7LQ8NHP1 331 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 PRAMEF25A6NGN4 478 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 TPOP07202 933 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 AKR1C3P42330 323 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 PRAMEF5Q5TYX0 476 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 PRAMEF6Q5VXH4 476 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 DPY19L2P2Q6ZN68 376 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 OR5K2Q8NHB8 316 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 IFT22Q9H7X7 185 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 IGSF5Q9NSI5 407 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 TRIP12Q14669 1992 aaPredicted RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 TRDV1A0A1B0GX56 115 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 TRABD2BA6NFA1 517 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 CNMDO75829 334 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 FKBP2P26885 142 aaKnown RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 CCR9P51686 369 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 ADPRHP54922 357 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 GLIS1Q8NBF1 620 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 TRAPPC1Q9Y5R8 145 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 UBR2Q8IWV8 1755 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF320A2RRD8 509 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 CORO6Q6QEF8 472 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 NAT6Q93015 286 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 CORINQ9Y5Q5 1042 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 ZNFX1Q9P2E3 1918 aaKnown RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 C5orf52A6NGY3 159 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 RPS23P62266 143 aaKnown RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 TMEM123Q8N131 208 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 OR1J1Q8NGS3 322 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 ACPTQ9BZG2 426 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 CD80P33681 288 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 ALKBH1Q13686 389 aaKnown RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 BTNL3Q6UXE8 466 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 KCNE4Q8WWG9 221 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 PINX1Q96BK5 328 aaKnown RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 AP5S1Q9NUS5 200 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 B3GALT5Q9Y2C3 310 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 SPRYD7Q5W111 196 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 ABHD4Q8TB40 342 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 CTDSP2O14595 271 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 GATCO43716 136 aaKnown RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 CLDN17P56750 224 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 CPEB1Q9BZB8 566 aaKnown RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 POLDIP2Q9Y2S7 368 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 FAM189BP81408 668 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 TPBGQ13641 420 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 FDX2Q6P4F2 183 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 GPR32P1Q8NGA4 272 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 DYNC2LI1Q8TCX1 351 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 NEIL2Q969S2 332 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 C11orf54Q9H0W9 315 aaPredicted RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 NXT1Q9UKK6 140 aaKnown RBP10.74□□□□□ -0.69
VPS13A-205ENST00000376636 SSR4P51571 173 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 SLC35G1Q2M3R5 365 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 AMIGO3Q86WK7 504 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 OR10AD1Q8NGE0 317 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 LHX4Q969G2 390 aa10.74□□□□□ -0.69
VPS13A-205ENST00000376636 A6NL46 340 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 F13BP05160 661 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 HIST1H1TP22492 207 aaPredicted RBP10.73□□□□□ -0.69
VPS13A-205ENST00000376636 SPCS3P61009 180 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 COMMD5Q9GZQ3 224 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 GPM6AP51674 278 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 CLEC4DQ8WXI8 215 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 UTP23Q9BRU9 249 aaKnown RBP10.73□□□□□ -0.69
VPS13A-205ENST00000376636 ATG101Q9BSB4 218 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 M0QZK8 103 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 GGCTO75223 188 aaKnown RBP10.73□□□□□ -0.69
VPS13A-205ENST00000376636 LGI1O95970 557 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 CALCBP10092 127 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 RPS25P62851 125 aaKnown RBP10.73□□□□□ -0.69
VPS13A-205ENST00000376636 FLVCR1Q9Y5Y0 555 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 G3V2L1 256 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 F2P00734 622 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 ITGB7P26010 798 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 C17orf67Q0P5P2 114 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 C9orf152Q5JTZ5 239 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 THEM4Q5T1C6 240 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 UBAC2Q8NBM4 344 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 OR5D18Q8NGL1 313 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 SOWAHBA6NEL2 793 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 FRS3O43559 492 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 RAF1P04049 648 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 OTUD1Q5VV17 481 aaPredicted RBP10.73□□□□□ -0.69
VPS13A-205ENST00000376636 PRR27Q6MZM9 219 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 OBP2AQ9NY56 170 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 TRBV4-1A0A0J9YWV2 114 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 A6NDN8 102 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 CSF2RAP15509 400 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 MGMTP16455 207 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 ELOBQ15370 118 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 PLXDC2Q6UX71 529 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 MAMDC4Q6UXC1 1216 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF573Q86YE8 665 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms