RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 OR10Z1Q8NGY1 313 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 C16orf52Q8NHV5 167 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 SEH1LQ96EE3 360 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 C4orf45Q96LM5 186 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 BARX1Q9HBU1 254 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 MMP25Q9NPA2 562 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 PLCL2Q9UPR0 1127 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 ERVK-19Q9WJR5 959 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 WDR87Q6ZQQ6 2873 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 OR5H14A6NHG9 310 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 NDUFA2O43678 99 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 SRPX2O60687 465 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 APBB3O95704 486 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 AMY2AP04746 511 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 MGMTP16455 207 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 CENPAP49450 140 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 STARP49675 285 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 MC2RQ01718 297 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 PM20D2Q8IYS1 436 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 GPX8Q8TED1 209 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 BMFQ96LC9 184 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 C1orf198Q9H425 327 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 SAV1Q9H4B6 383 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 ELOVL3Q9HB03 270 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 PCOLCE2Q9UKZ9 415 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 LOC100289279A0A1B0GTE1 492 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 KCNAB3O43448 404 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 WDPCPO95876 746 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 PNPP00491 289 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF28P17035 718 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 NFATC4Q14934 902 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 OR10K2Q6IF99 312 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 LIN54Q6MZP7 749 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 POMZP3Q6PJE2 187 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 SYT13Q7L8C5 426 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 ATG4DQ86TL0 474 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 MCATQ8IVS2 390 aaKnown RBP12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 CLRN3Q8NCR9 226 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 WDR92Q96MX6 357 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 G6PC3Q9BUM1 346 aa12.74□□□□□ -0.37
CLCNKA-202ENST00000375692 LOC100509620A0A075B734 347 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 CDC40O60508 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 PMS2P2O95744 297 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 HLA-DQA2P01906 255 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 MAOAP21397 527 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 MEP1BQ16820 701 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 SCGB2B2Q4G0G5 96 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 JMJD6Q6NYC1 403 aaPredicted RBP12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 TMEM185AQ8NFB2 350 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 OR1J4Q8NGS1 313 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 PHOSPHO1Q8TCT1 267 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 INTS14Q96SY0 518 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 CGGBP1Q9UFW8 167 aaPredicted RBP12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 FANCMQ8IYD8 2048 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 C17orf51A8MQB3 221 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 C2orf74A8MZ97 194 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC17A2O00624 439 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 TPPPO94811 219 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF432O94892 652 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 SEMA4FO95754 770 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 ASAH2BP0C7U1 165 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 UBBP0CG47 229 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 UBCP0CG48 685 aaKnown RBP12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 AKR1C2P52895 323 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 RPS27AP62979 156 aaKnown RBP12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 UBA52P62987 128 aaKnown RBP12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 AKR1C1Q04828 323 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 PDSS1Q5T2R2 415 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 ATPAF1Q5TC12 328 aaPredicted RBP12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 LINC00518Q8N0U6 118 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 RSC1A1Q92681 617 aa12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 VRK1Q99986 396 aaPredicted RBP12.73□□□□□ -0.37
CLCNKA-202ENST00000375692 C11orf98E9PRG8 122 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 DCNP07585 359 aaKnown RBP12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 RASGEF1BQ0VAM2 473 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 DHRS2Q13268 280 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 NKPD1Q17RQ9 610 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 KLHL26Q53HC5 615 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF542PQ5EBM4 170 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 GLYATL3Q5SZD4 288 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 WBP2NLQ6ICG8 309 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 MOB3CQ70IA8 216 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 METTL27Q8N6F8 245 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 OR4S1Q8NGB4 309 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 TAAR8Q969N4 342 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF471Q9BX82 626 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC19A3Q9BZV2 496 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 NKX6-2Q9C056 277 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 TWSG1Q9GZX9 223 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 ALX4Q9H161 411 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 WNT16Q9UBV4 365 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 ABCA7Q8IZY2 2146 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 A0A0J9YY10 115 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 PLGP00747 810 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 IGHV4-34P06331 123 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 ST6GAL1P15907 406 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms