RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 K7EPK0 472 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 STK17BO94768 372 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 DIRAS3O95661 229 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 ACSM4P0C7M7 580 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 GZMKP49863 264 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 PCBP3P57721 371 aaKnown RBP5.96□□□□□ -1.45
SMC1A-202ENST00000375340 CYCSP99999 105 aaKnown RBP5.96□□□□□ -1.45
SMC1A-202ENST00000375340 DOC2BQ14184 412 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 C2orf76Q3KRA6 126 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 KIRREL2Q6UWL6 708 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 FAM71E2Q8N5Q1 922 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 OR14A16Q8NHC5 309 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 LCORQ96JN0 433 aaPredicted RBP5.96□□□□□ -1.45
SMC1A-202ENST00000375340 TEX101Q9BY14 249 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 TIMM8BQ9Y5J9 83 aaPredicted RBP5.96□□□□□ -1.45
SMC1A-202ENST00000375340 SLC22A23A1A5C7 686 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 AGAP14A8MT82 685 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 NME2P1O60361 137 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 CEACAM5P06731 702 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 MYF5P13349 255 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 MMP15P51511 669 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 S100A12P80511 92 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF529Q6P280 563 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 FBXW12Q6X9E4 464 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 OR5L2Q8NGL0 311 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 OR2A1Q8NGT9 310 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 OR51E1Q8TCB6 317 aa5.96□□□□□ -1.45
SMC1A-202ENST00000375340 A0A087WV62 115 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 A0A1B0GUH1 482 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 CD14P08571 375 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 DRD1P21728 446 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 SERPINF1P36955 418 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 MLC1Q15049 377 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 MORN4Q8NDC4 146 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 C16orf52Q8NHV5 167 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 KTI12Q96EK9 354 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM59Q9BXS4 323 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 PUS1Q9Y606 427 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 SHISA8B8ZZ34 492 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ADRB1P08588 477 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 DBHP09172 617 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 PI3P19957 117 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 SDHAP31040 664 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 TAS2R46P59540 309 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 DUSP2Q05923 314 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 PDSS1Q5T2R2 415 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF100Q8IYN0 542 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF687Q8N1G0 1237 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 SUMF1Q8NBK3 374 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 SLC37A2Q8TED4 501 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 LMAN1LQ9HAT1 526 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 PRDM7Q9NQW5 492 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 HRH3Q9Y5N1 445 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 OR13C7P0DN81 318 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ZP3P21754 424 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 HNRNPKP61978 463 aaKnown RBP eCLIP5.96□□□□□ -1.461e-6■□□□□ 9.3
SMC1A-202ENST00000375340 MFGE8Q08431 387 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 MALLQ13021 153 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 CLINT1Q14677 625 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 NR0B2Q15466 257 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 OGFOD3Q6PK18 319 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 LINC00615Q96LM1 132 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 GPA33Q99795 319 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 TCEAL2Q9H3H9 227 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 FANCFQ9NPI8 374 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 DLL4Q9NR61 685 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 D6RAR5 112 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 GALR3O60755 368 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 CXCL3P19876 107 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 DIO1P49895 249 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 RBM39Q14498 530 aaKnown RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 FAM209AQ5JX71 171 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 AVPI1Q5T686 147 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 THSD4Q6ZMP0 1018 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 SLC51BQ86UW2 128 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 BPIFCQ8NFQ6 507 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 OR5L1Q8NGL2 311 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 PIGCQ92535 297 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 LINC00052Q96N35 136 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 PLEK2Q9NYT0 353 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 PPIL1Q9Y3C6 166 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ARID1AO14497 2285 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 HOXC8P31273 242 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF93P35789 620 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ETV6P41212 452 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 RPL27P61353 136 aaKnown RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 PPP1CAP62136 330 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 CLVS2Q5SYC1 327 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 GLDNQ6ZMI3 551 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 C9orf62Q8N4C0 152 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 NUDCD2Q8WVJ2 157 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 IL1F10Q8WWZ1 152 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 MARC2Q969Z3 335 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF578Q96N58 590 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF768Q9H5H4 540 aaKnown RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 KIF25Q9UIL4 384 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 OR4E1P0C645 316 aa5.96□□□□□ -1.46
SMC1A-202ENST00000375340 TSFMP43897 325 aaKnown RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 CPEB2Q7Z5Q1 589 aaKnown RBP5.96□□□□□ -1.46
SMC1A-202ENST00000375340 OR10R2Q8NGX6 335 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms