RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 PBX2P40425 430 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 HOXA1P49639 335 aaPredicted RBP19.08■□□□□ 0.65
UPF3A-202ENST00000375299 ATXN7L3Q14CW9 347 aaPredicted RBP19.08■□□□□ 0.65
UPF3A-202ENST00000375299 BOLLQ8N9W6 283 aaKnown RBP19.08■□□□□ 0.65
UPF3A-202ENST00000375299 OR13C8Q8NGS7 320 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 OR9A4Q8NGU2 314 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 PPP1R1CQ8WVI7 109 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 ZBTB8AQ96BR9 441 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 SEC22AQ96IW7 307 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 OR8B4Q96RC9 309 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 SYT4Q9H2B2 425 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 TMEM218A2RU14 115 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 C2orf74A8MZ97 194 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 ZNF736B4DX44 427 aaPredicted RBP19.08■□□□□ 0.64
UPF3A-202ENST00000375299 APODP05090 189 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 BDKRB2P30411 391 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 ATP1B3P54709 279 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 EGR4Q05215 589 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 SCGB2B2Q4G0G5 96 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 PUSL1Q8N0Z8 303 aaKnown RBP19.08■□□□□ 0.64
UPF3A-202ENST00000375299 GAL3ST1Q99999 423 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 MSRAQ9UJ68 235 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 SLC22A13Q9Y226 551 aa19.08■□□□□ 0.64
UPF3A-202ENST00000375299 ARPC4-TTLL3A0A0A6YYG9 625 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 RAD1O60671 282 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 HTR2CP28335 458 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 CASRP41180 1078 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 B2MP61769 119 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 SLC17A1Q14916 467 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 NFATC4Q14934 902 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 SVBPQ8N300 66 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 CCDC3Q9BQI4 270 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 ASF1BQ9NVP2 202 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 MLXQ9UH92 298 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 ZNF107Q9UII5 783 aaPredicted RBP19.07■□□□□ 0.64
UPF3A-202ENST00000375299 ATG2BQ96BY7 2078 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 A0A0C4DFX4 3053 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 SULT2B1O00204 365 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 DOK2O60496 412 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 CCR4P51679 360 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 MEP1BQ16820 701 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 KLHL26Q53HC5 615 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 TMEM225Q6GV28 225 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 TMEM184AQ6ZMB5 413 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 DHDHQ9UQ10 334 aa19.07■□□□□ 0.64
UPF3A-202ENST00000375299 FARSAQ9Y285 508 aaKnown RBP19.07■□□□□ 0.64
UPF3A-202ENST00000375299 A0A0J9YY10 115 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 OIP5O43482 229 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 HOXC4P09017 264 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-202ENST00000375299 ZNF28P17035 718 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 CAPZA1P52907 286 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 GPM6BQ13491 265 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.06■□□□□ 0.64
UPF3A-202ENST00000375299 PRAMEF17Q5VTA0 474 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 HAGHLQ6PII5 290 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-202ENST00000375299 LDLRAD3Q86YD5 345 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 ARMC10Q8N2F6 343 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 FAM131CQ96AQ9 280 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 WDR92Q96MX6 357 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 SLC6A7Q99884 636 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 GTF2A1LQ9UNN4 478 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 VSIG4Q9Y279 399 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 REV3LO60673 3130 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 LIPCP11150 499 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 HLA-GP17693 338 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 RPL35P42766 123 aaKnown RBP19.06■□□□□ 0.64
UPF3A-202ENST00000375299 CCINQ13939 588 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 C16orf52Q8NHV5 167 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 KLK13Q9UKR3 277 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 UNC80Q8N2C7 3258 aa19.06■□□□□ 0.64
UPF3A-202ENST00000375299 F5H0A9 414 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-202ENST00000375299 H0Y8X5 98 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 HCRTR1O43613 425 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 ADCYAP1P18509 176 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 ZBTB25P24278 435 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 SEC13P55735 322 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 PMPCAQ10713 525 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 CD226Q15762 336 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 TMEM88Q6PEY1 159 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 TAF8Q7Z7C8 310 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 LYG2Q86SG7 212 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 ADGRE4PQ86SQ3 457 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 YAF2Q8IY57 180 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 RNF128Q8TEB7 428 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 KTI12Q96EK9 354 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-202ENST00000375299 TAS2R4Q9NYW5 299 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 A0A1W2PPC1 479 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 PNPP00491 289 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 GPR3P46089 330 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 AKR1D1P51857 326 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 GUCA2BQ16661 112 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 GLYATL3Q5SZD4 288 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 FNDC7Q5VTL7 733 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 OTPQ5XKR4 325 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 SLC35D2Q76EJ3 337 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 NDUFAF7Q7L592 441 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 RAB11FIP2Q7L804 512 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 PPP1R14AQ96A00 147 aa19.05■□□□□ 0.64
UPF3A-202ENST00000375299 ELF4Q99607 663 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-202ENST00000375299 CKLFQ9UBR5 152 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms