RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 OR2J3O76001 311 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 DAPP51397 102 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 RAC1P63000 192 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 CSNK1G2P78368 415 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 TBCEQ15813 527 aaPredicted RBP13.15□□□□□ -0.31
TRAF1-201ENST00000373887 SPRED3Q2MJR0 410 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 HENMT1Q5T8I9 393 aaKnown RBP13.15□□□□□ -0.31
TRAF1-201ENST00000373887 ABHD4Q8TB40 342 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 CENPOQ9BU64 300 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 ENPP1P22413 925 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 IL3RAP26951 378 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 WDR76Q9H967 626 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 IGHV3-64DA0A0J9YX35 117 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF701M0R085 212 aaPredicted RBP13.14□□□□□ -0.31
TRAF1-201ENST00000373887 TAPBPO15533 448 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 CYTIPO60759 359 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF266Q14584 549 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 MEP1BQ16820 701 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 PRSS45Q7RTY3 260 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 THNSL2Q86YJ6 484 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 OR51H1Q8NH63 302 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 TAF9BQ9HBM6 251 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 OR52A1Q9UKL2 312 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 GON4LQ3T8J9 2241 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 SELENOFO60613 162 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 Q1RN00 199 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 PGAP1Q75T13 922 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 RBPMSQ93062 196 aaKnown RBP13.14□□□□□ -0.31
TRAF1-201ENST00000373887 GPR78Q96P69 363 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 RPP25Q9BUL9 199 aaKnown RBP13.14□□□□□ -0.31
TRAF1-201ENST00000373887 BARX1Q9HBU1 254 aaPredicted RBP13.14□□□□□ -0.31
TRAF1-201ENST00000373887 MAST2Q6P0Q8 1798 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 CBY3A6NI87 242 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 NDUFB7P17568 137 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 LIM2P55344 173 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 KIAA1024LP59773 190 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
TRAF1-201ENST00000373887 TSPAN31Q12999 210 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 OR5B3Q8NH48 314 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 TMEM255BQ8WV15 326 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 TM4SF18Q96CE8 201 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 PLA2G2FQ9BZM2 168 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 SERINC4A6NH21 518 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 EXOSC2Q13868 293 aaKnown RBP13.14□□□□□ -0.31
TRAF1-201ENST00000373887 ACKR1Q16570 336 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 FAM74A1Q5RGS3 127 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 ARSGQ96EG1 525 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 CCDC74BQ96LY2 380 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 LTB4R2Q9NPC1 389 aa13.14□□□□□ -0.31
TRAF1-201ENST00000373887 TMED7-TICAM2A0A0A6YYA0 188 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 SPINT2O43291 252 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 PMPCAQ10713 525 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 LPCAT3Q6P1A2 487 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 H2BFWTQ7Z2G1 175 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 C1orf87Q8N0U7 546 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 KCNG3Q8TAE7 436 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 PIGQQ9BRB3 760 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 MS4A8Q9BY19 250 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 ZCCHC4Q9H5U6 513 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 TMED7Q9Y3B3 224 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF93P35789 620 aaPredicted RBP13.13□□□□□ -0.31
TRAF1-201ENST00000373887 CMPK2Q5EBM0 449 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 OR2B11Q5JQS5 317 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 COX20Q5RI15 118 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF626Q68DY1 528 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 GDPD3Q7L5L3 318 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 SLCO5A1Q9H2Y9 848 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 FSCN3Q9NQT6 498 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 TCRBV3S1A0A5B6 114 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 FAM109BQ6ICB4 259 aaPredicted RBP13.13□□□□□ -0.31
TRAF1-201ENST00000373887 CD300LGQ6UXG3 332 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 TXLNGYQ9BZA5 131 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 BANF2Q9H503 90 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 TMEM30AQ9NV96 361 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 T-ENOLP0DO92 83 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 NAGAP17050 411 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 PFN3P60673 137 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 GLYATL3Q5SZD4 288 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 HIST2H3AQ71DI3 136 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 KDF1Q8NAX2 398 aaPredicted RBP13.13□□□□□ -0.31
TRAF1-201ENST00000373887 PPP1R3CQ9UQK1 317 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 SNX11Q9Y5W9 270 aa13.13□□□□□ -0.31
TRAF1-201ENST00000373887 CLDN24A6NM45 220 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 DEGS1O15121 323 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 CXCL10P02778 98 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 TCRBP04435 133 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 ZDHHC11BP0C7U3 371 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 APEX1P27695 318 aaKnown RBP13.12□□□□□ -0.31
TRAF1-201ENST00000373887 PTTG1IPP53801 180 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 HAGHQ16775 308 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 NKAIN1Q4KMZ8 207 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 TMEM196Q5HYL7 178 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 TOR2AQ5JU69 321 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms