RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TMEM30AQ9NV96 361 aa13.05□□□□□ -0.32
LMX1B-202ENST00000373474 RPH3ALQ9UNE2 315 aa13.05□□□□□ -0.32
LMX1B-202ENST00000373474 URGCP-MRPS24S4R325 110 aa13.05□□□□□ -0.32
LMX1B-202ENST00000373474 P2RY10O00398 339 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 CLDN17P56750 224 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 RSPO2Q6UXX9 243 aaPredicted RBP13.04□□□□□ -0.32
LMX1B-202ENST00000373474 POFUT1Q9H488 388 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 IKZF5Q9H5V7 419 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 FKRPQ9H9S5 495 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 C12orf10Q9HB07 376 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 LTB4R2Q9NPC1 389 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 RAB22AQ9UL26 194 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 SPP1P10451 314 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 GDPD3Q7L5L3 318 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 LGI3Q8N145 548 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 RBMXL3Q8N7X1 1067 aaKnown RBP13.04□□□□□ -0.32
LMX1B-202ENST00000373474 CLRN3Q8NCR9 226 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 OR13C9Q8NGT0 318 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 OR2G3Q8NGZ4 309 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 GABARAPH6UMI1 98 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 JTBO76095 146 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 IGFBP1P08833 259 aaPredicted RBP13.04□□□□□ -0.32
LMX1B-202ENST00000373474 TNFSF4P23510 183 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 GRB2P62993 217 aaKnown RBP13.04□□□□□ -0.32
LMX1B-202ENST00000373474 DPTQ07507 201 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 DUSP5Q16690 384 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 CORO6Q6QEF8 472 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 NPSR1Q6W5P4 371 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 SLC25A19Q9HC21 320 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 LAMB2P55268 1798 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 TRBV5-4A0A0C4DH59 114 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 CLDN1O95832 211 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 H2AFB1P0C5Y9 115 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 ANXA7P20073 488 aaKnown RBP13.04□□□□□ -0.32
LMX1B-202ENST00000373474 CLINT1Q14677 625 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 TOR2AQ5JU69 321 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 DMBX1Q8NFW5 382 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 SLC35A4Q96G79 324 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 PCDHGA1Q9Y5H4 931 aa13.04□□□□□ -0.32
LMX1B-202ENST00000373474 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
LMX1B-202ENST00000373474 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 SLC35A1P78382 337 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 ENDOGQ14249 297 aaKnown RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 SLC17A1Q14916 467 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 SMAD2Q15796 467 aaKnown RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 PET117Q6UWS5 81 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 TMEM99Q8N816 258 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 OR4A16Q8NH70 328 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 DVL3Q92997 716 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 OBP2AQ9NY56 170 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 MUTYHQ9UIF7 546 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 RGS11O94810 467 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 IRS1P35568 1242 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 C17orf67Q0P5P2 114 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 PDZD11Q5EBL8 140 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 ACSM5Q6NUN0 579 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 PRSS45Q7RTY3 260 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 PPP1R3BQ86XI6 285 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 HSD17B11Q8NBQ5 300 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 OR6M1Q8NGM8 313 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 SLC6A18Q96N87 628 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 I6L893 689 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 M0QYG6 137 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 HOXC11O43248 304 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 ZNF620Q6ZNG0 422 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 RABEPKQ7Z6M1 372 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 BPIFCQ8NFQ6 507 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 VN1R2Q8NFZ6 395 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 LRFN5Q96NI6 719 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 ELF4Q99607 663 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 DUSP22Q9NRW4 184 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 DLEC1Q9Y238 1755 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 ZFP92A6NM28 416 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 TGFBR1P36897 503 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 BIDP55957 195 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 IHHQ14623 411 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 Q6ZTK2 550 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 PTOV1Q86YD1 416 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 ZNF511Q8NB15 262 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 NXPE3Q969Y0 559 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 C20orf24Q9BUV8 137 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 OCEL1Q9H607 264 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 MBNL1Q9NR56 388 aaKnown RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 LYRM2Q9NU23 88 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 OR52A1Q9UKL2 312 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 PCDHB10Q9UN67 800 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 MT-ATP6P00846 226 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 CHRNB4P30926 498 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 HNRNPA3P51991 378 aaKnown RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 TMEM176BQ3YBM2 270 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 ZNF684Q5T5D7 378 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 OR2L13Q8N349 312 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 GNPNAT1Q96EK6 184 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-202ENST00000373474 OPALINQ96PE5 141 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 NUMBLQ9Y6R0 609 aa13.03□□□□□ -0.32
LMX1B-202ENST00000373474 ZC3H12DA2A288 527 aaKnown RBP13.02□□□□□ -0.32
LMX1B-202ENST00000373474 ZNF724A8MTY0 619 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms