RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 RFX2P48378 723 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 CCR6P51684 374 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 PMS2P11Q13670 270 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 CNN3Q15417 329 aaKnown RBP12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 TMEM52BQ4KMG9 183 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 ADAMTSL4Q6UY14 1074 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 Q6ZRG5 221 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 CREB3L4Q8TEY5 395 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 SPTSSAQ969W0 71 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 DCTP40126 519 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 ERVPABLB-1P60509 514 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 AADACL3Q5VUY0 350 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 STUMQ69YW2 141 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 COMMD6Q7Z4G1 85 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 BCORQ6W2J9 1755 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 LAMB1P07942 1786 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 OR4A47Q6IF82 309 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 DTWD1Q8N5C7 304 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 OR2M3Q8NG83 312 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 OR13F1Q8NGS4 319 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 NKX3-1Q99801 234 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 SMIM7Q9BQ49 75 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 SOX7Q9BT81 388 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 LTB4R2Q9NPC1 389 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 SDR39U1Q9NRG7 319 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 MIOXQ9UGB7 285 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 KCND3Q9UK17 655 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 BLACEA4D250 179 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 ACOD1A6NK06 481 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 AP4M1O00189 453 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 ACAA2P42765 397 aaKnown RBP12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 Q7L0L9 218 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 LAX1Q8IWV1 398 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 CARFQ8N187 725 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 SPEM1Q8N4L4 309 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 OR4A4PQ8NGN8 299 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 FER1L6-AS2Q96M78 137 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 LYSMD1Q96S90 227 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 ANKRD19PQ9H560 264 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 SEMA4GQ9NTN9 838 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 IL20Q9NYY1 176 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 RNF150Q9ULK6 438 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 NCBP2LA6PVI3 153 aaKnown RBP12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 C1orf105O95561 183 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 GSK3AP49840 483 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 PPP1CBP62140 327 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 TMEM268Q5VZI3 342 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 ACOT7LQ6ZUV0 252 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 CLDN22Q8N7P3 220 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 OR52R1Q8NGF1 315 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 DDOQ99489 341 aa12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 SOX21Q9Y651 276 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF1-202ENST00000372190 UGDHO60701 494 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 CD1EP15812 388 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 TMEM11P17152 192 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 SFTPDP35247 375 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 GABRA4P48169 554 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 DCDP81605 110 aaKnown RBP12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 ZNF738Q8NE65 137 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 ZNF680Q8NEM1 530 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 TMEM174Q8WUU8 243 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 INPP5KQ9BT40 448 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 SIAH2O43255 324 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 BCL6P41182 706 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 RGNQ15493 299 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 DMBX1Q8NFW5 382 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 UTP4Q969X6 686 aaKnown RBP12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 FAM24AA6NFZ4 105 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 GABRPO00591 440 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 SLC16A6O15403 523 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 OLFM2O95897 454 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 ADPRHP54922 357 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 PCBP4P57723 403 aaKnown RBP12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 TEKQ02763 1124 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 HBMQ6B0K9 141 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 FCRLAQ7L513 359 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 WDR5BQ86VZ2 330 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 TMEM19Q96HH6 336 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 DHRS4Q9BTZ2 278 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 NTMT1Q9BV86 223 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 FBXO34Q9NWN3 711 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 PCDHA9Q9Y5H5 950 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 GCH1P30793 250 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 SDHAP31040 664 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 DIO1P49895 249 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 EMP1P54849 157 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 REC114Q7Z4M0 266 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 SIAH3Q8IW03 269 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 TMEM123Q8N131 208 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 OR4K5Q8NGD3 323 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 NEIL2Q969S2 332 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 RSG1Q9BU20 258 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 GSTO2Q9H4Y5 243 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 DMRT3Q9NQL9 472 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 MN1Q10571 1320 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 SLC35A2P78381 396 aa12.94□□□□□ -0.34
RAPGEF1-202ENST00000372190 ZNF691Q5VV52 312 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms