RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 LIPNQ5VXI9 398 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 HIST2H2BCQ6DN03 193 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 LYPD4Q6UWN0 246 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 PM20D2Q8IYS1 436 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 ZNF454Q8N9F8 522 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 OR4M2Q8NGB6 313 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 ZNF417Q8TAU3 575 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 RNF166Q96A37 237 aaPredicted RBP12.61□□□□□ -0.39
LDB3-204ENST00000372066 OR8B4Q96RC9 309 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 ZNF587Q96SQ5 575 aaPredicted RBP12.61□□□□□ -0.39
LDB3-204ENST00000372066 WACQ9BTA9 647 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 NOX4Q9NPH5 578 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 PPP4R1LQ9P1A2 415 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 MYOTQ9UBF9 498 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 IKZF2Q9UKS7 526 aa12.61□□□□□ -0.39
LDB3-204ENST00000372066 USP9YO00507 2555 aaPredicted RBP12.61□□□□□ -0.39
LDB3-204ENST00000372066 IGLV1-36A0A0B4J1U3 117 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 FAM47E-STBD1D6RA91 191 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 H7C1C5 153 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 AIPO00170 330 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 CTDSPLO15194 276 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 ZNF254O75437 659 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 TPPPO94811 219 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 AKR7A3O95154 331 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 ATF1P18846 271 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 AHCYP23526 432 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 FKBP2P26885 142 aaKnown RBP12.6□□□□□ -0.39
LDB3-204ENST00000372066 KIR2DL3P43628 341 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 CCR9P51686 369 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 NANOS3P60323 173 aaKnown RBP12.6□□□□□ -0.39
LDB3-204ENST00000372066 LCN6P62502 163 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 CD300CQ08708 224 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 NTRK2Q16620 822 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 LCN10Q6JVE6 187 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 SLC18B1Q6NT16 456 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 TMEM81Q6P7N7 255 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 KCTD18Q6PI47 426 aaPredicted RBP12.6□□□□□ -0.39
LDB3-204ENST00000372066 LYPD8Q6UX82 237 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 H1FNTQ75WM6 255 aaPredicted RBP12.6□□□□□ -0.39
LDB3-204ENST00000372066 ADPRHL1Q8NDY3 354 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 TRIM63Q969Q1 353 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 MAP6Q96JE9 813 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 C7orf50Q9BRJ6 194 aaKnown RBP12.6□□□□□ -0.39
LDB3-204ENST00000372066 SERINC1Q9NRX5 453 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 ALKBH4Q9NXW9 302 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 KLRF1Q9NZS2 232 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 ZNF221Q9UK13 617 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 KLHDC2Q9Y2U9 406 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 WIF1Q9Y5W5 379 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 FAM240BA0A1B0GVZ2 78 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 SLC22A23A1A5C7 686 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 TVP23AA6NH52 213 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 A6NL46 340 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 PRR32B1ATL7 298 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 C9J4A7 227 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 RAB40ALP0C0E4 278 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 CALCBP10092 127 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 HLA-DMAP28067 261 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 DDOSTP39656 456 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 MMP15P51511 669 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 CLDN20P56880 219 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 ROM1Q03395 351 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 SNTA1Q13424 505 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 EXT1Q16394 746 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 RSBN1Q5VWQ0 802 aaPredicted RBP12.6□□□□□ -0.39
LDB3-204ENST00000372066 ZNF57Q68EA5 555 aaPredicted RBP12.6□□□□□ -0.39
LDB3-204ENST00000372066 LRRN1Q6UXK5 716 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 DPY19L4Q7Z388 723 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 DND1Q8IYX4 353 aaKnown RBP12.6□□□□□ -0.39
LDB3-204ENST00000372066 OR2G2Q8NGZ5 317 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 ZNF671Q8TAW3 534 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 NSMAFQ92636 917 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 DEFB126Q9BYW3 111 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 HDHD2Q9H0R4 259 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 TCF7L1Q9HCS4 588 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 CHST11Q9NPF2 352 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 SACM1LQ9NTJ5 587 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 CAMK2AQ9UQM7 478 aa12.6□□□□□ -0.39
LDB3-204ENST00000372066 A0A1W2PNV4 684 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 OR4C45A6NMZ5 311 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 IFITM5A6NNB3 132 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 C17orf51A8MQB3 221 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 TP53I11O14683 189 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 PIN1P1O15428 100 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 GSTZ1O43708 216 aaPredicted RBP12.59□□□□□ -0.39
LDB3-204ENST00000372066 ZNF354AO60765 605 aaPredicted RBP12.59□□□□□ -0.39
LDB3-204ENST00000372066 ATP6V1G1O75348 118 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 SLC43A1O75387 559 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 CD63P08962 238 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 FAM157BP0CG42 384 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 GLO1Q04760 184 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 FOXF1Q12946 379 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 INPP5JQ15735 1006 aaPredicted RBP12.59□□□□□ -0.39
LDB3-204ENST00000372066 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 BICRALQ6AI39 1079 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 HDDC2Q7Z4H3 204 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 ZNF679Q8IYX0 411 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 FDCSPQ8NFU4 85 aa12.59□□□□□ -0.39
LDB3-204ENST00000372066 OR6F1Q8NGZ6 308 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms