RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ZNF285Q96NJ3 590 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 RBM38Q9H0Z9 239 aaKnown RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 CGGBP1Q9UFW8 167 aaPredicted RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 G3V3Y1 287 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 LALBAP00709 142 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 RPP30P78346 268 aaKnown RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 BCL2A1Q16548 175 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 TIGD3Q6B0B8 471 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 HEPHL1Q6MZM0 1159 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 SVBPQ8N300 66 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF845Q96IR2 970 aaPredicted RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 DOK1Q99704 481 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 SRRQ9GZT4 340 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 S1PR5Q9H228 398 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 ZMAT3Q9HA38 289 aaKnown RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 GPATCH2Q9NW75 528 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 GPR160Q9UJ42 338 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 PRSS37A4D1T9 235 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF587BE7ETH6 402 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 M0QYG6 137 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 GIPP09681 153 aaPredicted RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 CSF3P09919 207 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 MSR1P21757 451 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 PCBP3P57721 371 aaKnown RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 PLA2G7Q13093 441 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 EIF4EBP2Q13542 120 aaPredicted RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 THEM4Q5T1C6 240 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 SYT9Q86SS6 491 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 SPEM1Q8N4L4 309 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 ESX1Q8N693 406 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 OR51S1Q8NGJ8 323 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 SEC22CQ9BRL7 303 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 FAM212BQ9NTI7 297 aaPredicted RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 TRAV1-2A0A0B4J238 106 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 C2orf72A6NCS6 295 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 RNF212BA8MTL3 300 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 METTL12A8MUP2 240 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 TOR1AO14656 332 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 IMPA2O14732 288 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ICOSLGO75144 302 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 HOXC4P09017 264 aaPredicted RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 GALP22466 123 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 DGCR2P98153 550 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 AGERQ15109 404 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 CD300LDQ6UXZ3 194 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 CCDC190Q86UF4 302 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 GPR32P1Q8NGA4 272 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 OR56B2PQ8NGI1 322 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 TTC9Q92623 222 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 DVL3Q92997 716 aaPredicted RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 COX14Q96I36 57 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 FYTTD1Q96QD9 318 aaKnown RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 CTRCQ99895 268 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 EMC6Q9BV81 110 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 SMIM3Q9BZL3 60 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 GSX2Q9BZM3 304 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 NMNAT2Q9BZQ4 307 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 OBP2BQ9NPH6 170 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 MYOTQ9UBF9 498 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 SCGB2A1O75556 95 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 GABRG2P18507 467 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 SRP9P49458 86 aaKnown RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 SUMO3P55854 103 aaPredicted RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ARF1P84077 181 aaKnown RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 CDK5Q00535 292 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 TIAL1Q01085 375 aaKnown RBP eCLIP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ESCO2Q56NI9 601 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF628Q5EBL2 1059 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF547Q8IVP9 402 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 NAXDQ8IW45 347 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 MRPL41Q8IXM3 137 aaKnown RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ETFBKMTQ8IXQ9 262 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 LINC01555Q8NAE3 123 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 LIPHQ8WWY8 451 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 SGK3Q96BR1 496 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 OR2A14Q96R47 310 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ARPC5LQ9BPX5 153 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 OR51B6Q9H340 312 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 A0A087WUJ7 227 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 KLRC4-KLRK1H3BQV0 150 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 FADS1O60427 444 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 PRAMEF4O60810 478 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 IFNA4P05014 189 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF728P0DKX0 622 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 HCCSP53701 268 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 GFERP55789 205 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 CATR1Q13166 79 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 PRTGQ2VWP7 1150 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 FAM219BQ5XKK7 198 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 C8orf82Q6P1X6 216 aaPredicted RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF707Q96C28 371 aaPredicted RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 SLAMF6Q96DU3 332 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 TMEM68Q96MH6 324 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 OCSTAMPQ9BR26 566 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 PLA2G12AQ9BZM1 189 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 CDCP1Q9H5V8 836 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 PLEKHA3Q9HB20 300 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 KCNE3Q9Y6H6 103 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 POU2F2P09086 479 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms