RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 COA3Q9Y2R0 106 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-204ENST00000370496 POLR1DQ9Y2S0 133 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 OR6C68A6NDL8 312 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 SHISA9B4DS77 424 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 RAF1P04049 648 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 IGFBP5P24593 272 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 GRK5P34947 590 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 DAPP51397 102 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 NAAAQ02083 359 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 GLO1Q04760 184 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 PLP2Q04941 152 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 KEAP1Q14145 624 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 CRMP1Q14194 572 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 RAB39AQ14964 217 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 FAM27BQ5VT28 67 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.9□□□□□ -0.34
COL9A1-204ENST00000370496 PARP8Q8N3A8 854 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 PROKR2Q8NFJ6 384 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 FGFBP3Q8TAT2 258 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 NEUROG1Q92886 237 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 CCL19Q99731 98 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 RACGAP1Q9H0H5 632 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 LIME1Q9H400 295 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 ENOPH1Q9UHY7 261 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 ST6GALNAC2Q9UJ37 374 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 ATP23Q9Y6H3 246 aa12.9□□□□□ -0.34
COL9A1-204ENST00000370496 TACC2O95359 2948 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 IGLV1-36A0A0B4J1U3 117 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 IQCMA0A1B0GVH7 501 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 C12orf71A8MTZ7 269 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 ANKRD65E5RJM6 399 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 HLA-DQA2P01906 255 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 CST2P09228 141 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF14P17017 642 aaPredicted RBP12.89□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF32P17041 273 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 DNASE1P24855 282 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 PCBD1P61457 104 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 GINS1Q14691 196 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 NPEPL1Q8NDH3 523 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 OR9Q1Q8NGQ5 310 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 OR2T4Q8NH00 348 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 OTULINQ96BN8 352 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 PLEKHA8Q96JA3 519 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF416Q9BWM5 594 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 C1orf198Q9H425 327 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 SRA1Q9HD15 236 aaKnown RBP12.89□□□□□ -0.35
COL9A1-204ENST00000370496 CMC2Q9NRP2 79 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 FAIMQ9NVQ4 179 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 CISD1Q9NZ45 108 aaKnown RBP12.89□□□□□ -0.35
COL9A1-204ENST00000370496 B9D1Q9UPM9 204 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 FKBP7Q9Y680 259 aa12.89□□□□□ -0.35
COL9A1-204ENST00000370496 CADP27708 2225 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 DCTN6O00399 190 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 MITFO75030 526 aaPredicted RBP12.88□□□□□ -0.35
COL9A1-204ENST00000370496 MMP7P09237 267 aaPredicted RBP12.88□□□□□ -0.35
COL9A1-204ENST00000370496 PAICSP22234 425 aaKnown RBP12.88□□□□□ -0.35
COL9A1-204ENST00000370496 CALCRP30988 508 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 ENDOGQ14249 297 aaKnown RBP12.88□□□□□ -0.35
COL9A1-204ENST00000370496 KDM4DQ6B0I6 523 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 B3GLCTQ6Y288 498 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 OR6V1Q8N148 313 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 PQLC1Q8N2U9 271 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF611Q8N823 705 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 SLC30A7Q8NEW0 376 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 IL17RDQ8NFM7 739 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 OR10H5Q8NGA6 315 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 NINJ1Q92982 152 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 FBXO17Q96EF6 278 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 CIB1Q99828 191 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 RBM4BQ9BQ04 359 aaKnown RBP12.88□□□□□ -0.35
COL9A1-204ENST00000370496 RBM4Q9BWF3 364 aaKnown RBP12.88□□□□□ -0.35
COL9A1-204ENST00000370496 PRRG3Q9BZD7 231 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 HEATR1Q9H583 2144 aaKnown RBP12.88□□□□□ -0.35
COL9A1-204ENST00000370496 SLC25A19Q9HC21 320 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 ORC6Q9Y5N6 252 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 POLQO75417 2590 aa12.88□□□□□ -0.35
COL9A1-204ENST00000370496 NOTCH2Q04721 2471 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 CSMD1Q96PZ7 3565 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 FAM171A2A8MVW0 826 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 BAG2O95816 211 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 GPANK1O95872 356 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 PTHP01270 115 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 SERPINA5P05154 406 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 GAAP10253 952 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 PYCR1P32322 319 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 APLNRP35414 380 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 CRISP1P54107 249 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 ESRRGP62508 458 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 GALK2Q01415 458 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 SCRN3Q0VDG4 424 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 DBPQ10586 325 aaPredicted RBP12.87□□□□□ -0.35
COL9A1-204ENST00000370496 AQP6Q13520 282 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 TBC1D28Q2M2D7 210 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 PABPC1L2AQ5JQF8 200 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 OTPQ5XKR4 325 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 UGT2A3Q6UWM9 527 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 ZBTB46Q86UZ6 589 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF584Q8IVC4 421 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms