RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 OR13C5Q8NGS8 318 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 NXF2Q9GZY0 626 aaKnown RBP11.49□□□□□ -0.57
HCFC1-202ENST00000369984 ZNF732B4DXR9 585 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 H0YGG7 62 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 DTYMKP23919 212 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 UBE2G1P62253 170 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 TMEFF1Q8IYR6 380 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 ANGPTL6Q8NI99 470 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 SLC25A46Q96AG3 418 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 OR6C1Q96RD1 312 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 MUTYHQ9UIF7 546 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 OR6C68A6NDL8 312 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 NKX6-3A6NJ46 265 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 NME1P15531 152 aaKnown RBP11.48□□□□□ -0.57
HCFC1-202ENST00000369984 FCN2Q15485 313 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 CEBPEQ15744 281 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 TMEM182Q6ZP80 229 aaPredicted RBP11.48□□□□□ -0.57
HCFC1-202ENST00000369984 SLC46A3Q7Z3Q1 461 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 SCCPDHQ8NBX0 429 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 RIMS4Q9H426 269 aaPredicted RBP11.48□□□□□ -0.57
HCFC1-202ENST00000369984 GDE1Q9NZC3 331 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 SELENOFO60613 162 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 SLC17A1Q14916 467 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 TBC1D28Q2M2D7 210 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 C5orf46Q6UWT4 87 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 THNSL2Q86YJ6 484 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 NMES1Q9C002 83 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 ZNF724A8MTY0 619 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 CGB2Q6NT52 195 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.576e-8■■■□□ 14.6
HCFC1-202ENST00000369984 CPEB2Q7Z5Q1 589 aaKnown RBP11.48□□□□□ -0.57
HCFC1-202ENST00000369984 ADGRG3Q86Y34 549 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 OR2L13Q8N349 312 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 PRSS35Q8N3Z0 413 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 IFI44Q8TCB0 444 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 ADAM29Q9UKF5 820 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 MYADML2A6NDP7 307 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 OR5K3A6NET4 321 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 RGS11O94810 467 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 AREGP15514 252 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 JAG1P78504 1218 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 MFAP5Q13361 173 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 HAGHQ16775 308 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 ADPRMQ3LIE5 342 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 COX20Q5RI15 118 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 EGLN2Q96KS0 407 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 UTP23Q9BRU9 249 aaKnown RBP11.48□□□□□ -0.57
HCFC1-202ENST00000369984 AKIRIN1Q9H9L7 192 aaPredicted RBP11.48□□□□□ -0.57
HCFC1-202ENST00000369984 UMAD1C9J7I0 102 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 GRPP07492 148 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 CTSAP10619 480 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 NTHL1P78549 312 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 PRSS45Q7RTY3 260 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 OR5B3Q8NH48 314 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 BARHL1Q9BZE3 327 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 SHARPINQ9H0F6 387 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 USP22Q9UPT9 525 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 PAPLNO95428 1278 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 ACKR3P25106 362 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 HLA-FP30511 346 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 CTSCP53634 463 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 EDDM3AQ14507 147 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 OPN5Q6U736 354 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 ZNF620Q6ZNG0 422 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 PARS2Q7L3T8 475 aaKnown RBP11.48□□□□□ -0.57
HCFC1-202ENST00000369984 AAED1Q7RTV5 226 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 LYSMD2Q8IV50 215 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 TIMM29Q9BSF4 260 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 CHST8Q9H2A9 424 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 KCPQ6ZWJ8 1503 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 PI4KAP42356 2102 aa11.48□□□□□ -0.57
HCFC1-202ENST00000369984 LRP6O75581 1613 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 SERINC4A6NH21 518 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 YKT6O15498 198 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 EFSO43281 561 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 ADRB1P08588 477 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 FURINP09958 794 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 H2AFB1P0C5Y9 115 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 SPI1P17947 270 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 SUB1P53999 127 aaKnown RBP eCLIP11.47□□□□□ -0.575e-6■■□□□ 11.9
HCFC1-202ENST00000369984 RAB38P57729 211 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 ZNF468Q5VIY5 522 aaPredicted RBP11.47□□□□□ -0.57
HCFC1-202ENST00000369984 NAXDQ8IW45 347 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 OR4F5Q8NH21 305 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 SLC35A4Q96G79 324 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 OR4F4Q96R69 305 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 NKX2-4Q9H2Z4 354 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 GPR55Q9Y2T6 319 aaPredicted RBP11.47□□□□□ -0.57
HCFC1-202ENST00000369984 SCRG1O75711 98 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 CD276Q5ZPR3 534 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 ZNF626Q68DY1 528 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 MED25Q71SY5 747 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 OR51S1Q8NGJ8 323 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 KLF16Q9BXK1 252 aaPredicted RBP11.47□□□□□ -0.57
HCFC1-202ENST00000369984 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 PLEKHF2Q9H8W4 249 aa11.47□□□□□ -0.57
HCFC1-202ENST00000369984 BARX1Q9HBU1 254 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms