RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 FN3KQ9H479 309 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 RERGLQ9H628 205 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 PCDHGB5Q9Y5G0 923 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 NAV2Q8IVL1 2488 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 DCTN6O00399 190 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 MITFO75030 526 aaPredicted RBP13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 UBL3O95164 117 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 CLIC3O95833 236 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 RAF1P04049 648 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 ZNF14P17017 642 aaPredicted RBP13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 NAAAQ02083 359 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 SGCAQ16586 387 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 SLC36A3Q495N2 470 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 FAM169BQ8N8A8 192 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 ATG16L2Q8NAA4 619 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 NANOS1Q8WY41 292 aaKnown RBP13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 RADILQ96JH8 1075 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 RBM4BQ9BQ04 359 aaKnown RBP13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 ADI1Q9BV57 179 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 RBM4Q9BWF3 364 aaKnown RBP13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 OSBPL10Q9BXB5 764 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 NUAK2Q9H093 628 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 E7EQL1 145 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 H0YJX3 145 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 AHCYL1O43865 530 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 SLC16A7O60669 478 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 FARS2O95363 451 aaKnown RBP13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 GPANK1O95872 356 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 GNAO1P09471 354 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 CD53P19397 219 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 LAP3P28838 519 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 NOS3P29474 1203 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 ARR3P36575 388 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 PPP2R2BQ00005 443 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 RAB39AQ14964 217 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 C3orf36Q3SXR2 165 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 NRN1LQ496H8 165 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 UGT2A3Q6UWM9 527 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 SLC16A14Q7RTX9 510 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 JAZF1Q86VZ6 243 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 ZNF584Q8IVC4 421 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 IQCF1Q8N6M8 205 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 SIAEQ9HAT2 523 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 COA3Q9Y2R0 106 aaPredicted RBP13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 DSCAMO60469 2012 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 OTOGQ6ZRI0 2925 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 ROS1P08922 2347 aa13.09□□□□□ -0.31
SMPDL3A-201ENST00000368440 AKAP9Q99996 3911 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 OR6C68A6NDL8 312 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 MMP7P09237 267 aaPredicted RBP13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 IGFBP5P24593 272 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 DAPP51397 102 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 COX10Q12887 443 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 KEAP1Q14145 624 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 DHRSXQ8N5I4 330 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNF611Q8N823 705 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 OR52E2Q8NGJ4 325 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 FBXW5Q969U6 566 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 FBXO17Q96EF6 278 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 TOR3AQ9H497 397 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 EMC7Q9NPA0 242 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 C8orf4Q9NR00 106 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 POLE4Q9NR33 117 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 UBAP1Q9NZ09 502 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 CISD1Q9NZ45 108 aaKnown RBP13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 POU2F3Q9UKI9 436 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 ORC6Q9Y5N6 252 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 IGHV2OR16-5A0A0B4J2B6 119 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 IDH3BO43837 385 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 MPZL1O95297 269 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 RAB36O95755 333 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 ANXA8P13928 327 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 NPR2P20594 1047 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 PAX7P23759 505 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 ENDOGQ14249 297 aaKnown RBP13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNF362Q5T0B9 420 aaPredicted RBP13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 C20orf204Q6ZNR8 217 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 LNX2Q8N448 690 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 CYB561A3Q8NBI2 242 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 NPEPL1Q8NDH3 523 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 NRBF2Q96F24 287 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 RNF121Q9H920 327 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 MOV10Q9HCE1 1003 aaKnown RBP13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 RPRD1BQ9NQG5 326 aaKnown RBP13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 TMEFF2Q9UIK5 374 aaPredicted RBP13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 ITGB1BP2Q9UKP3 347 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 ATP23Q9Y6H3 246 aa13.08□□□□□ -0.32
SMPDL3A-201ENST00000368440 IGLV1-36A0A0B4J1U3 117 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 H3BN98 237 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 DENRO43583 198 aaKnown RBP13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 KHDRBS3O75525 346 aaKnown RBP13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 RENP00797 406 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 CRYAAP02489 173 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 SOD3P08294 240 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 DANCRP0C864 163 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNF32P17041 273 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 DNASE1P24855 282 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms