RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SGCAQ16586 387 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 HFEQ30201 348 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 THEM4Q5T1C6 240 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 MBNL2Q5VZF2 373 aaKnown RBP13.61□□□□□ -0.23
CKS1B-202ENST00000368436 THSD4Q6ZMP0 1018 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 C1orf174Q8IYL3 243 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 C10orf82Q8WW14 230 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 RAB1CQ92928 201 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 ALG12Q9BV10 488 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 TMPRSS13Q9BYE2 586 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 SAP30LQ9HAJ7 183 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 EIF3KQ9UBQ5 218 aaKnown RBP13.61□□□□□ -0.23
CKS1B-202ENST00000368436 PCDHB10Q9UN67 800 aa13.61□□□□□ -0.23
CKS1B-202ENST00000368436 TENM1Q9UKZ4 2725 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 LOC105371242A0A075B767 164 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 A0A0G2JMP0 313 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 A0A0X1KG70 313 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 C5orf49A4QMS7 147 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 J3QLI3 93 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 TPD52L2O43399 206 aaKnown RBP13.6□□□□□ -0.23
CKS1B-202ENST00000368436 IGHMP01871 453 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 ADH4P08319 380 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 EPHA1P21709 976 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 GCH1P30793 250 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 MPV17P39210 176 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 COMPP49747 757 aaPredicted RBP13.6□□□□□ -0.23
CKS1B-202ENST00000368436 GDI2P50395 445 aaKnown RBP13.6□□□□□ -0.23
CKS1B-202ENST00000368436 HILS1P60008 231 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 CD47Q08722 323 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 CYBRD1Q53TN4 286 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 ALG10Q5BKT4 473 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 UNQ6126/PRO20091Q6UXV3 157 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 FOXL2NBQ6ZUU3 175 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 C1QL2Q7Z5L3 287 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 LRRC75AQ8NAA5 344 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 OR4M2Q8NGB6 313 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 AKR7LQ8NHP1 331 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 SLC25A40Q8TBP6 338 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 FNDC8Q8TC99 324 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 KLF14Q8TD94 323 aaPredicted RBP13.6□□□□□ -0.23
CKS1B-202ENST00000368436 FAM216AQ8WUB2 273 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 IPCEF1Q8WWN9 437 aaPredicted RBP13.6□□□□□ -0.23
CKS1B-202ENST00000368436 NSMAFQ92636 917 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 ELMOD3Q96FG2 381 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 TMEM120AQ9BXJ8 343 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 WNT5BQ9H1J7 359 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 KLHL21Q9UJP4 597 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 A4GNTQ9UNA3 340 aa13.6□□□□□ -0.23
CKS1B-202ENST00000368436 WNK2Q9Y3S1 2297 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 SPRY3O43610 288 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 PIP5K1CO60331 668 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 UBOX5O94941 541 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 CST2P09228 141 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 MAKP20794 623 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 LAP3P28838 519 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 KDELR2P33947 212 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 LIPAP38571 399 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 RPL27P61353 136 aaKnown RBP13.59□□□□□ -0.23
CKS1B-202ENST00000368436 ERVK-25P63136 954 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 ST3GAL3Q11203 375 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 SPATA46Q5T0L3 261 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 RFPL4BQ6ZWI9 263 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 BPIFA2Q96DR5 249 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 TIMD4Q96H15 378 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 RBP7Q96R05 134 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 OR2H1Q9GZK4 316 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 OR2J1Q9GZK6 312 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 VIPAS39Q9H9C1 493 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 CYSLTR2Q9NS75 346 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 MRGBPQ9NV56 204 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 TIMM10BQ9Y5J6 103 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 ARHGAP32A7KAX9 2087 aa13.59□□□□□ -0.23
CKS1B-202ENST00000368436 PLSCR5A0PG75 271 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 TMEM89A2RUT3 159 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 ZSCAN5BA6NJL1 495 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 BBIP1A8MTZ0 92 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 H3BSA7 217 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 MRASO14807 208 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 IFI30P13284 250 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 GATA3P23771 443 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 SELENOWP63302 87 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 KLF10Q13118 480 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 TOP3AQ13472 1001 aaPredicted RBP13.58□□□□□ -0.24
CKS1B-202ENST00000368436 FHL1Q13642 323 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 HDXQ7Z353 690 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 PEG10Q86TG7 708 aaKnown RBP13.58□□□□□ -0.24
CKS1B-202ENST00000368436 ALDH16A1Q8IZ83 802 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 CLDN22Q8N7P3 220 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 CCL17Q92583 94 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 PRRC1Q96M27 445 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 EGLN1Q9GZT9 426 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 CGGBP1Q9UFW8 167 aaPredicted RBP13.58□□□□□ -0.24
CKS1B-202ENST00000368436 ZDHHC8Q9ULC8 765 aa13.58□□□□□ -0.24
CKS1B-202ENST00000368436 TRIM77I1YAP6 450 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 RGS9O75916 674 aaPredicted RBP13.57□□□□□ -0.24
CKS1B-202ENST00000368436 NGFP01138 241 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 CD55P08174 381 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 FUT4P22083 530 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 CTXN1P60606 82 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms