RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 MYOZ1Q9NP98 299 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 ING1Q9UK53 422 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 TMEM272A0A1B0GTI8 110 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 F5H5P2 479 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 MEN1O00255 615 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 RLN1P04808 185 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 LPLP06858 475 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 GABRA1P14867 456 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ENPP1P22413 925 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ABCD3P28288 659 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 CALCRP30988 508 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 S100A11P31949 105 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ARL4DP49703 201 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 TAS2R19P59542 299 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 GMFBP60983 142 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
CD48-201ENST00000368045 ADAM8P78325 824 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ZP2Q05996 745 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 BAMBIQ13145 260 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 KCNAB1Q14722 419 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 MFSD13AQ14CX5 517 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ODF4Q2M2E3 257 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 YOD1Q5VVQ6 348 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 POMZP3Q6PJE2 187 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 DNM1P34Q6PK57 102 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 NDUFAF7Q7L592 441 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 NAXDQ8IW45 347 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 OR1J4Q8NGS1 313 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 OR52N5Q8NH56 324 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 ASB5Q8WWX0 329 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 PTX4Q96A99 478 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 SLC25A21Q9BQT8 299 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 ABHD6Q9BV23 337 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 POTEKPQ9BYX7 375 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ATG5Q9H1Y0 275 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ZNF304Q9HCX3 659 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 SLC22A13Q9Y226 551 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 R4GMQ9 66 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 A0A1W2PPC1 479 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 NPIPB13A6NJU9 1138 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 METTL12A8MUP2 240 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 NPIPB4C9JG80 1138 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 NUDT21O43809 227 aaKnown RBP12.85□□□□□ -0.35
CD48-201ENST00000368045 PNPP00491 289 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 ITGB2P05107 769 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 PPP3CBP16298 524 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 CTLA4P16410 223 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 ACHEP22303 614 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 HTR2CP28335 458 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 SLC26A5P58743 744 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 ZP4Q12836 540 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 NSDHLQ15738 373 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 DEGS2Q6QHC5 323 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 BIVMQ86UB2 503 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 GABRG1Q8N1C3 465 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 OR51S1Q8NGJ8 323 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 TMEM234Q8WY98 164 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 EDAQ92838 391 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
CD48-201ENST00000368045 NRSN2Q9GZP1 204 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 NARFLQ9H6Q4 476 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 MED11Q9P086 117 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 HHLA2Q9UM44 414 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 EML5Q05BV3 1969 aa12.85□□□□□ -0.35
CD48-201ENST00000368045 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 SRSF10O75494 262 aaKnown RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 RP2O75695 350 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 KDM4BO94953 1096 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 CD3DP04234 171 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 ISG15P05161 165 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 PTGS2P35354 604 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 GUCA2AQ02747 115 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 MFGE8Q08431 387 aaPredicted RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 TDGQ13569 410 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 HLXQ14774 488 aaPredicted RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 ARHGAP40Q5TG30 622 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 ASPHD2Q6ICH7 369 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 NHLRC1Q6VVB1 395 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 ZNF704Q6ZNC4 412 aaPredicted RBP12.84□□□□□ -0.35
CD48-201ENST00000368045 ADGRE4PQ86SQ3 457 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 D2HGDHQ8N465 521 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 ZNF248Q8NDW4 579 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 OR52B4Q8NGK2 314 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 OR1L3Q8NH93 324 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 EXO5Q9H790 373 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 GTF2A1LQ9UNN4 478 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 LRP12Q9Y561 859 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 H3BUI4 141 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 GMFGO60234 142 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 DOK2O60496 412 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 PMS2P2O95744 297 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 FBXO45P0C2W1 286 aa12.84□□□□□ -0.35
CD48-201ENST00000368045 SUMO3P55854 103 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms