RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 LRGUKQ96M69 825 aa20.62■□□□□ 0.89
PFDN2-201ENST00000368010 THTPAQ9BU02 230 aa20.62■□□□□ 0.89
PFDN2-201ENST00000368010 RAB1BQ9H0U4 201 aa20.62■□□□□ 0.89
PFDN2-201ENST00000368010 IER3IP1Q9Y5U9 82 aa20.62■□□□□ 0.89
PFDN2-201ENST00000368010 IGHV4-30-2A0A087WSY4 118 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 TMEM129A0AVI4 362 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 TNFRSF11BO00300 401 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 SOCS2O14508 198 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 LY6HO94772 140 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 ERCC1P07992 297 aaPredicted RBP20.61■□□□□ 0.89
PFDN2-201ENST00000368010 APEHP13798 732 aaKnown RBP20.61■□□□□ 0.89
PFDN2-201ENST00000368010 MSR1P21757 451 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 SLC6A6P31641 620 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 EVX1P49640 407 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 PCBD1P61457 104 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 RFX4Q33E94 735 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 FAM98BQ52LJ0 330 aaKnown RBP20.61■□□□□ 0.89
PFDN2-201ENST00000368010 C1orf94Q6P1W5 598 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 PAQR4Q8N4S7 273 aaPredicted RBP20.61■□□□□ 0.89
PFDN2-201ENST00000368010 GNPDA2Q8TDQ7 276 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 FAM168AQ92567 244 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 CLPTM1LQ96KA5 538 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 MRPL37Q9BZE1 423 aaKnown RBP20.61■□□□□ 0.89
PFDN2-201ENST00000368010 SYT4Q9H2B2 425 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 OR52D1Q9H346 318 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 POLE4Q9NR33 117 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 LYVE1Q9Y5Y7 322 aa20.61■□□□□ 0.89
PFDN2-201ENST00000368010 C2CD3Q4AC94 2353 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 C12orf71A8MTZ7 269 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 UBOX5O94941 541 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 PPP1R3DO95685 299 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 TXNDC12O95881 172 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 FAM157BP0CG42 384 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 APEX1P27695 318 aaKnown RBP20.6■□□□□ 0.89
PFDN2-201ENST00000368010 GSSP48637 474 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 HMGA2P52926 109 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 MSMPQ1L6U9 139 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 MAPK1IP1LQ8NDC0 245 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 CPEB3Q8NE35 698 aaKnown RBP20.6■□□□□ 0.89
PFDN2-201ENST00000368010 TRIM15Q9C019 465 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 ARFGEF3Q5TH69 2177 aa20.6■□□□□ 0.89
PFDN2-201ENST00000368010 SLC25A16P16260 332 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 CTLA4P16410 223 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 STOMP27105 288 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 PSG4Q00888 419 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 TSPAN31Q12999 210 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 DNAL1Q4LDG9 190 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 RGS7BPQ6MZT1 257 aaPredicted RBP20.59■□□□□ 0.89
PFDN2-201ENST00000368010 PGBD2Q6P3X8 592 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 ALDH16A1Q8IZ83 802 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 LINC00471Q8N535 108 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 AKR7LQ8NHP1 331 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 ERMAPQ96PL5 475 aaPredicted RBP20.59■□□□□ 0.89
PFDN2-201ENST00000368010 SYT3Q9BQG1 590 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 OR2H1Q9GZK4 316 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 OR51B6Q9H340 312 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 RERGLQ9H628 205 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 MYOZ1Q9NP98 299 aaPredicted RBP20.59■□□□□ 0.89
PFDN2-201ENST00000368010 VSX1Q9NZR4 365 aaPredicted RBP20.59■□□□□ 0.89
PFDN2-201ENST00000368010 TIMM10BQ9Y5J6 103 aa20.59■□□□□ 0.89
PFDN2-201ENST00000368010 M0R233 179 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 GYG2O15488 501 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 SLC16A7O60669 478 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 KHDRBS3O75525 346 aaKnown RBP20.58■□□□□ 0.89
PFDN2-201ENST00000368010 CCNOP22674 350 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 PCSK6P29122 969 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 RAD52P43351 418 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 PDLIM4P50479 330 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 ENDOGQ14249 297 aaKnown RBP20.58■□□□□ 0.89
PFDN2-201ENST00000368010 SYT9Q86SS6 491 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 C10orf105Q8TEF2 133 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 NEU4Q8WWR8 484 aaPredicted RBP20.58■□□□□ 0.89
PFDN2-201ENST00000368010 WACQ9BTA9 647 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 ZNF416Q9BWM5 594 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 BCL2L14Q9BZR8 327 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 EMC7Q9NPA0 242 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 FZR1Q9UM11 496 aa20.58■□□□□ 0.89
PFDN2-201ENST00000368010 SETD2Q9BYW2 2564 aaPredicted RBP20.58■□□□□ 0.88
PFDN2-201ENST00000368010 IMPA2O14732 288 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 ARPC3O15145 178 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 SYNGR3O43761 229 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 CCNB2O95067 398 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 LCKP06239 509 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 ADRA2AP08913 450 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 GDI2P50395 445 aaKnown RBP20.57■□□□□ 0.88
PFDN2-201ENST00000368010 UCP2P55851 309 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 TRAP1Q12931 704 aaKnown RBP20.57■□□□□ 0.88
PFDN2-201ENST00000368010 DNM1P34Q6PK57 102 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 UGT2A3Q6UWM9 527 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 ZNF620Q6ZNG0 422 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 PTCHD4Q6ZW05 846 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 OR9Q2Q8NGE9 314 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 OR4C15Q8NGM1 316 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 POM121L2Q96KW2 1035 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 SAMD8Q96LT4 415 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 IFT27Q9BW83 186 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 WNT5BQ9H1J7 359 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 REEP1Q9H902 201 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 DUSP13Q9UII6 198 aa20.57■□□□□ 0.88
PFDN2-201ENST00000368010 A0A1W2PPW3 197 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms