RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CMC2Q9NRP2 79 aa10.9□□□□□ -0.66
CAPN9-203ENST00000366666 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
CAPN9-203ENST00000366666 NPIPA1Q9UND3 350 aa10.9□□□□□ -0.66
CAPN9-203ENST00000366666 PHF3Q92576 2039 aaKnown RBP10.9□□□□□ -0.67
CAPN9-203ENST00000366666 OR6C68A6NDL8 312 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 KDM4EB2RXH2 506 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 OR6A2O95222 327 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 IFNGR1P15260 489 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 ERP29P30040 261 aaKnown RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 HTR2BP41595 481 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 CARD18P57730 90 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 SLC35A1P78382 337 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 KLHL22Q53GT1 634 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 ESPNLQ6ZVH7 1005 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 EXD3Q8N9H8 876 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 KDF1Q8NAX2 398 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 SLC37A3Q8NCC5 494 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 GALNT11Q8NCW6 608 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 ZNF775Q96BV0 537 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 DIRAS2Q96HU8 199 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 KCTD7Q96MP8 289 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 ZNF582Q96NG8 517 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 TSSK2Q96PF2 358 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 SLC38A2Q96QD8 506 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 DDOQ99489 341 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 TTYH2Q9BSA4 534 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 EMC6Q9BV81 110 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 C11orf54Q9H0W9 315 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 KCNN2Q9H2S1 579 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 EXO5Q9H790 373 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 PLEKHB1Q9UF11 243 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 ZMIZ1Q9ULJ6 1067 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 B3GALT5Q9Y2C3 310 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 FREM1Q5H8C1 2179 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 A0A0X1KG70 313 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 A0A1W2PQL4 384 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 AQP7P3A6NL99 342 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 C12orf71A8MTZ7 269 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 A8MV72 311 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 DCTN6O00399 190 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 ARPC3O15145 178 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 APOL3O95236 402 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 AZGP1P25311 298 aaKnown RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 PTBP1P26599 531 aaKnown RBP eCLIP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 FKBP2P26885 142 aaKnown RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 SDHAP31040 664 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 MFSD13AQ14CX5 517 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 TAB1Q15750 504 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 LCN1P1Q5VSP4 162 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 LIPKQ5VXJ0 399 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 TMEM225Q6GV28 225 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 PAQR6Q6TCH4 344 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 METAP1DQ6UB28 335 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 MED12LQ86YW9 2145 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 NPEPL1Q8NDH3 523 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 OR51L1Q8NGJ5 315 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 OR2V1Q8NHB1 315 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 ZC3HAV1LQ96H79 300 aaKnown RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 ARHGAP9Q9BRR9 750 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 PRORYQ9H606 182 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 NARFLQ9H6Q4 476 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 RANGRFQ9HD47 186 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 MRPS18AQ9NVS2 196 aaKnown RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 GRHPRQ9UBQ7 328 aa10.89□□□□□ -0.67
CAPN9-203ENST00000366666 NUFIP1Q9UHK0 495 aaKnown RBP10.89□□□□□ -0.67
CAPN9-203ENST00000366666 SMG1Q96Q15 3661 aaKnown RBP10.88□□□□□ -0.67
CAPN9-203ENST00000366666 GJE1A6NN92 205 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 IGHG3P01860 377 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 HLA-DQB1P01920 261 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 HMGN1P05114 100 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 NTF4P34130 210 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 RAC3P60763 192 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 B2MP61769 119 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 ZP4Q12836 540 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 HNRNPA0Q13151 305 aaKnown RBP10.88□□□□□ -0.67
CAPN9-203ENST00000366666 PYDC2Q56P42 97 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 AADACL4Q5VUY2 407 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 ARHGAP11AQ6P4F7 1023 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 CXXC5Q7LFL8 322 aaKnown RBP10.88□□□□□ -0.67
CAPN9-203ENST00000366666 OR52I1Q8NGK6 324 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 LHFPL5Q8TAF8 219 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 ZNF519Q8TB69 540 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 ZFAND1Q8TCF1 268 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 PCDHGB7Q9Y5F8 929 aa10.88□□□□□ -0.67
CAPN9-203ENST00000366666 TRAF3IP2O43734 574 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-203ENST00000366666 ZNF780AO75290 641 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-203ENST00000366666 SDC2P34741 201 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 RPL27P61353 136 aaKnown RBP10.87□□□□□ -0.67
CAPN9-203ENST00000366666 PPP3R1P63098 170 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 TPBGQ13641 420 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 PRR30Q53SZ7 412 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-203ENST00000366666 Q5BKY6 102 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 LEG1Q6P5S2 330 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 LYPD4Q6UWN0 246 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 LILRB1Q8NHL6 650 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-203ENST00000366666 ENKURQ8TC29 256 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 WDYHV1Q96HA8 205 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 ZNF385AQ96PM9 386 aaKnown RBP10.87□□□□□ -0.67
CAPN9-203ENST00000366666 TXNIPQ9H3M7 391 aa10.87□□□□□ -0.67
CAPN9-203ENST00000366666 NIPAL2Q9H841 368 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms