RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 NTN1O95631 604 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 LGI1O95970 557 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 LINGO3P0C6S8 592 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 UBTFL6P0CB48 400 aaPredicted RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 GKN3PP0CG01 181 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 PRG2P13727 222 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 HPGDP15428 266 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 IL7RP16871 459 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 TCN1P20061 433 aaPredicted RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 KDELR2P33947 212 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 EIF1P41567 113 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 ASCL1P50553 236 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 P2RX1P51575 399 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 SUCLG1P53597 346 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 DLX5P56178 289 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 MS4A2Q01362 244 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 GABPB1Q06547 395 aaPredicted RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 EPS8Q12929 822 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 GUSBP1Q15486 140 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 NPTX1Q15818 432 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 NRF1Q16656 503 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 CTU2Q2VPK5 515 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 PLPPR5Q32ZL2 321 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 DNAL1Q4LDG9 190 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 ZNF311Q5JNZ3 666 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 RAET1LQ5VY80 246 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 ASRGL1Q7L266 308 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 EIF3MQ7L2H7 374 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 PATL1Q86TB9 770 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 ARHGAP24Q8N264 748 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 OR5W2Q8NH69 310 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 B4GALNT2Q8NHY0 566 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 TMEM163Q8TC26 289 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 GPR119Q8TDV5 335 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 FIG4Q92562 907 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 SLC25A28Q96A46 364 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 ADGRG7Q96K78 797 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 WDFY2Q96P53 400 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 ARHGDIGQ99819 225 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 BTBD10Q9BSF8 475 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 THTPAQ9BU02 230 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 PINK1Q9BXM7 581 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 LRMDAQ9H2I8 198 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 GHITMQ9H3K2 345 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 MCCC2Q9HCC0 563 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 EXOSC3Q9NQT5 275 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 MED17Q9NVC6 651 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 PRPF19Q9UMS4 504 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 RPH3AQ9Y2J0 694 aaPredicted RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 IFT52Q9Y366 437 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 ROS1P08922 2347 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 FREM1Q5H8C1 2179 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 MAP1AP78559 2803 aaPredicted RBP6.84□□□□□ -1.31
YBX3-204ENST00000366290 NIPBLQ6KC79 2804 aaeCLIP6.84□□□□□ -1.31
YBX3-204ENST00000366290 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 H3BNH8 94 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 FAAHO00519 579 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 ACOT8O14734 319 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 ARPC2O15144 300 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 GYG2O15488 501 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 EFNA2O43921 213 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 SERPINB7O75635 380 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 TNFSF13O75888 250 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 ATP5HO75947 161 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 RGS11O94810 467 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 TGM6O95932 706 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 ATP6V1B2P21281 511 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 TCEA1P23193 301 aaKnown RBP6.84□□□□□ -1.31
YBX3-204ENST00000366290 HTR2AP28223 471 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 ELK4P28324 431 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 CLDN20P56880 219 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 HOXC5Q00444 222 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 SORDQ00796 357 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 SRYQ05066 204 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 LRRC23Q53EV4 343 aaPredicted RBP6.84□□□□□ -1.31
YBX3-204ENST00000366290 CYBRD1Q53TN4 286 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 SLC25A53Q5H9E4 307 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 DCAF12L2Q5VW00 463 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 GLYATQ6IB77 296 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 OR2A2Q6IF42 318 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 TSEN54Q7Z6J9 526 aaKnown RBP6.84□□□□□ -1.31
YBX3-204ENST00000366290 VTCN1Q7Z7D3 282 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 RBM45Q8IUH3 476 aaKnown RBP6.84□□□□□ -1.31
YBX3-204ENST00000366290 FAM86B1Q8N7N1 296 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 NRACQ8N912 160 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 OR5M1Q8NGP8 315 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 RNASE6Q93091 150 aaKnown RBP6.84□□□□□ -1.31
YBX3-204ENST00000366290 SLC35B4Q969S0 331 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 OTULINQ96BN8 352 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 ZNF607Q96SK3 696 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 PIGMQ9H3S5 423 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 GORASP2Q9H8Y8 452 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 RNF122Q9H9V4 155 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 KRCC1Q9NPI7 259 aaPredicted RBP6.84□□□□□ -1.31
YBX3-204ENST00000366290 VDAC3Q9Y277 283 aa6.84□□□□□ -1.31
YBX3-204ENST00000366290 PRR14LQ5THK1 2151 aa6.84□□□□□ -1.32
YBX3-204ENST00000366290 A0A1W2PNV4 684 aa6.83□□□□□ -1.32
YBX3-204ENST00000366290 CFAP73A6NFT4 308 aa6.83□□□□□ -1.32
YBX3-204ENST00000366290 SLC22A20A6NK97 555 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms