RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 UGT2A1Q9Y4X1 527 aa17.86■□□□□ 0.45
CD47-202ENST00000361309 PPIAL4EA0A075B759 164 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 PPIAL4CA0A0B4J2A2 164 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 PPIAL4DF5H284 164 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 FOXH1O75593 365 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 PPIAL4FP0DN26 164 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 FUT1P19526 365 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 GDI2P50395 445 aaKnown RBP17.85■□□□□ 0.45
CD47-202ENST00000361309 DAP3P51398 398 aaKnown RBP17.85■□□□□ 0.45
CD47-202ENST00000361309 MTPNP58546 118 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 SGCAQ16586 387 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 TUSC1Q2TAM9 212 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 UNQ6126/PRO20091Q6UXV3 157 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 HDDC2Q7Z4H3 204 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 DEFB108BQ8NET1 73 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 POP5Q969H6 163 aaKnown RBP17.85■□□□□ 0.45
CD47-202ENST00000361309 MMP26Q9NRE1 261 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 INIPQ9NRY2 104 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 CYSLTR2Q9NS75 346 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 DCAF16Q9NXF7 216 aa17.85■□□□□ 0.45
CD47-202ENST00000361309 IGKV1D-43A0A0B4J1Z2 117 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 MT-ND1P03886 318 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 ADH4P08319 380 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 PRTN3P24158 256 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 AQP2P41181 271 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 ATP4BP51164 291 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 ERVK-25P63136 954 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 PSG4Q00888 419 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 FMODQ06828 376 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 ARMCX4Q5H9R4 360 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 RFPL4BQ6ZWI9 263 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 DOK3Q7L591 496 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 DHDDSQ86SQ9 333 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 PATL1Q86TB9 770 aaKnown RBP17.84■□□□□ 0.45
CD47-202ENST00000361309 PFN4Q8NHR9 129 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 ABHD4Q8TB40 342 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 SLC26A7Q8TE54 656 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 NSMAFQ92636 917 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 TAMM41Q96BW9 452 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 DCLRE1CQ96SD1 692 aaKnown RBP17.84■□□□□ 0.45
CD47-202ENST00000361309 NPHS2Q9NP85 383 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 ZNF69Q9UC07 566 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 KLHL21Q9UJP4 597 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 PURGQ9UJV8 347 aaKnown RBP17.84■□□□□ 0.45
CD47-202ENST00000361309 NUP50Q9UKX7 468 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 ZDHHC8Q9ULC8 765 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 NPTNQ9Y639 398 aa17.84■□□□□ 0.45
CD47-202ENST00000361309 DNAJC9-AS1A6NH13 148 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 OR7A10O76100 309 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 IGHV2-70P01814 119 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 SBK2P0C263 348 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 RBMXP38159 391 aaKnown RBP17.83■□□□□ 0.44
CD47-202ENST00000361309 LIPAP38571 399 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 PPP1CBP62140 327 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 ARMC4Q5T2S8 1044 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 BCL6BQ8N143 479 aaPredicted RBP17.83■□□□□ 0.44
CD47-202ENST00000361309 MOSPD2Q8NHP6 518 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 HDAC2Q92769 488 aaKnown RBP17.83■□□□□ 0.44
CD47-202ENST00000361309 NMD3Q96D46 503 aaKnown RBP17.83■□□□□ 0.44
CD47-202ENST00000361309 CGREF1Q99674 301 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 NANOGQ9H9S0 305 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 TMBIM4Q9HC24 238 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 MSL2Q9HCI7 577 aa17.83■□□□□ 0.44
CD47-202ENST00000361309 NGFP01138 241 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 CD55P08174 381 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 CD47Q08722 323 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 KLF17Q5JT82 389 aaPredicted RBP17.82■□□□□ 0.44
CD47-202ENST00000361309 NKAIN4Q8IVV8 208 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 SLC30A8Q8IWU4 369 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 TMEM255BQ8WV15 326 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 SGTBQ96EQ0 304 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 C1orf147Q96MC9 270 aaPredicted RBP17.82■□□□□ 0.44
CD47-202ENST00000361309 DIRC2Q96SL1 478 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 WNT5BQ9H1J7 359 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 SMURF2Q9HAU4 748 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 C20orf141Q9NUB4 165 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 STX18Q9P2W9 335 aaKnown RBP17.82■□□□□ 0.44
CD47-202ENST00000361309 CGGBP1Q9UFW8 167 aaPredicted RBP17.82■□□□□ 0.44
CD47-202ENST00000361309 EGFL7Q9UHF1 273 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 AUP1Q9Y679 476 aa17.82■□□□□ 0.44
CD47-202ENST00000361309 TRAPPC2LH3BP13 241 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 IGHMP01871 453 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 VIMP08670 466 aaKnown RBP17.81■□□□□ 0.44
CD47-202ENST00000361309 PCGF2P35227 344 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 TNFAIP6P98066 277 aaPredicted RBP17.81■□□□□ 0.44
CD47-202ENST00000361309 ZNF154Q13106 437 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 FAM27BQ5VT28 67 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 SLC25A47Q6Q0C1 308 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 C1orf174Q8IYL3 243 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 DPP10Q8N608 796 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 LRRC8CQ8TDW0 803 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 ZNF48Q96MX3 618 aaPredicted RBP17.81■□□□□ 0.44
CD47-202ENST00000361309 GPA33Q99795 319 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 OR2H1Q9GZK4 316 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 KAT8Q9H7Z6 458 aaKnown RBP17.81■□□□□ 0.44
CD47-202ENST00000361309 UNKLQ9H9P5 680 aaKnown RBP17.81■□□□□ 0.44
CD47-202ENST00000361309 PLEK2Q9NYT0 353 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 NDUFAF1Q9Y375 327 aa17.81■□□□□ 0.44
CD47-202ENST00000361309 H3BSA7 217 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 TSPAN19P0C672 248 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms