RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TSACCQ96A04 125 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SNX11Q9Y5W9 270 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 LOC100289279A0A1B0GTE1 492 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 AQP7O14520 342 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 CST2P09228 141 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SIRPAP78324 504 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF443Q9Y2A4 671 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 POLDIP2Q9Y2S7 368 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 LY86O95711 162 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 OPRD1P41143 372 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC11A1P49279 550 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 ARSDP51689 593 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 TEKQ02763 1124 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 MOB3CQ70IA8 216 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC22A24Q8N4F4 322 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 OR10X1Q8NGY0 326 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 FAM234AQ9H0X4 552 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 ZMAT3Q9HA38 289 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 FANCMQ8IYD8 2048 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 TRBV11-1A0A0K0K1C0 115 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 H3BQ06 376 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SYT5O00445 386 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SIAH2O43255 324 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 NAGAP17050 411 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 INHBCP55103 352 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 C6orf132Q5T0Z8 1188 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF534Q76KX8 674 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 FAM3CQ92520 227 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 OR5M11Q96RB7 305 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 CD207Q9UJ71 328 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 TUBAL3A6NHL2 446 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 LRRC3CA6NJW4 275 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 HCRTO43612 131 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 YPEL5P62699 121 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 HOXC5Q00444 222 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 REEP5Q00765 189 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF718Q3SXZ3 478 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 TEX261Q6UWH6 196 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 NLGN4YQ8NFZ3 816 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 U3KQ87 197 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 F2P00734 622 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 HBA1P69905 142 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 Q6ZTK2 550 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 FAM57BQ71RH2 274 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CIB3Q96Q77 187 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 BARX1Q9HBU1 254 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 STRAPQ9Y3F4 350 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 OR2A25A4D2G3 310 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF264O43296 627 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 IL1RNP18510 177 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 SDC1P18827 310 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 RFX2P48378 723 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF528Q3MIS6 628 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ZBTB37Q5TC79 503 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF626Q68DY1 528 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 DHRS11Q6UWP2 260 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CBARPQ8N350 705 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 RELL2Q8NC24 303 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 RAB18Q9NP72 206 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 DUSP22Q9NRW4 184 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 NOSIPQ9Y314 301 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 RNASEK-C17orf49H0YIS7 233 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 OR2T7P0C7T2 308 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 DUSP1P28562 367 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 AKR1C3P42330 323 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 GGNBP1Q5YKI7 109 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 USP53Q70EK8 1073 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 PRSS42Q7Z5A4 293 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CMTM4Q8IZR5 234 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 LGI3Q8N145 548 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 TMEM106AQ96A25 262 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 NMES1Q9C002 83 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 WWTR1Q9GZV5 400 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CLMPQ9H6B4 373 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 UCK1Q9HA47 277 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 MN1Q10571 1320 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 A0A1W2PPQ1 181 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CSF2RAP15509 400 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 BLVRBP30043 206 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CXCL12P48061 93 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ADPRHP54922 357 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 LINC00299Q6ZSB3 139 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC38A6Q8IZM9 456 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ACPTQ9BZG2 426 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 HSD17B6O14756 317 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CNMDO75829 334 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 SMIM18P0DKX4 95 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CR2P20023 1033 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 CLEC4DQ8WXI8 215 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 EXTL1Q92935 676 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 DDX60Q8IY21 1712 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF320A2RRD8 509 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 JUNBP17275 347 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF280AP59817 542 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 SIX1Q15475 284 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 OR1Q1Q15612 314 aa12.19□□□□□ -0.46
SRGAP3-201ENST00000360413 ETFDHQ16134 617 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms